RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 DUX4L3P0CJ86 424 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 DUX4L4P0CJ87 422 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 DUX4L5P0CJ88 424 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 DUX4L6P0CJ89 424 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 DUX4L7P0CJ90 424 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 ADCYAP1P18509 176 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 CAV2P51636 162 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 HMGN3Q15651 99 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 PYY3Q5JQD4 70 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 DUX4L9Q6RFH8 374 aaPredicted RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 CLEC2AQ6UVW9 174 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 SELENOHQ8IZQ5 122 aaKnown RBP8.31□□□□□ -1.08
VTA1-205ENST00000620996 CCL17Q92583 94 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 CCL13Q99616 98 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 DUX4Q9UBX2 424 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 TUBD1Q9UJT1 453 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 TMED3Q9Y3Q3 217 aa8.31□□□□□ -1.08
VTA1-205ENST00000620996 TUBAL3A6NHL2 446 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 IFNL4K9M1U5 179 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 KALRNO60229 2985 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 F2RP25116 425 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 CA7P43166 264 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 ASCL1P50553 236 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 OR1S2Q8NGQ3 325 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 TCEAL7Q9BRU2 100 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 TOLLIPQ9H0E2 274 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 FAM234AQ9H0X4 552 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 MBNL3Q9NUK0 354 aaKnown RBP8.3□□□□□ -1.08
VTA1-205ENST00000620996 PSG11Q9UQ72 335 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 DIDO1Q9BTC0 2240 aaKnown RBP8.3□□□□□ -1.08
VTA1-205ENST00000620996 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 A0A1W2PR64 198 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 ST8SIA3O43173 380 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 DEDDO75618 318 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 LMO1P25800 156 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 VAMP2P63027 116 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 GAMTQ14353 236 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 NUP37Q8NFH4 326 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 ABHD14BQ96IU4 210 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 SPIN2AQ99865 258 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 SPIN2BQ9BPZ2 258 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 SAP30LQ9HAJ7 183 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 JKAMPQ9P055 326 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 IL19Q9UHD0 177 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 ZDHHC8Q9ULC8 765 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 ODAMA1E959 279 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 UBE2CO00762 179 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 CD3EP07766 207 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 TPT1P13693 172 aaKnown RBP8.3□□□□□ -1.08
VTA1-205ENST00000620996 DAOP14920 347 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 NKX2-1P43699 371 aaPredicted RBP8.3□□□□□ -1.08
VTA1-205ENST00000620996 AARDQ4LEZ3 155 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 FAM216BQ8N7L0 139 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 PRR7Q8TB68 274 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 TMED6Q8WW62 240 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 CLCC1Q96S66 551 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 FAM96BQ9Y3D0 163 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 RELNP78509 3460 aa8.3□□□□□ -1.08
VTA1-205ENST00000620996 TMEM218A2RU14 115 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 H0Y980 276 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 HEXAP06865 529 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 OR8U8P0C7N1 319 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 TNFRSF1AP19438 455 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 DDTP30046 118 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 RND3P61587 244 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 ZNF816Q0VGE8 651 aaPredicted RBP8.29□□□□□ -1.08
VTA1-205ENST00000620996 DRAM1Q8N682 238 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 LEAP2Q969E1 77 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 PLEKHF2Q9H8W4 249 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 SEBOXQ9HB31 216 aaPredicted RBP8.29□□□□□ -1.08
VTA1-205ENST00000620996 SMG1Q96Q15 3661 aaKnown RBP8.29□□□□□ -1.08
VTA1-205ENST00000620996 POLEQ07864 2286 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.29□□□□□ -1.08
VTA1-205ENST00000620996 LRRC30A6NM36 301 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 C17orf100A8MU93 164 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 MGST3O14880 152 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 TMPRSS2O15393 492 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 HKR1P10072 659 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 CHRNB4P30926 498 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 CXorf66Q5JRM2 361 aaPredicted RBP8.29□□□□□ -1.08
VTA1-205ENST00000620996 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 ST6GALNAC3Q8NDV1 305 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 SNX22Q96L94 193 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 EGLN1Q9GZT9 426 aa8.29□□□□□ -1.08
VTA1-205ENST00000620996 E5RGE8 158 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 FBXO24O75426 580 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 PLAUP00749 431 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 S100A2P29034 98 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 RPL7L1Q6DKI1 246 aaKnown RBP8.28□□□□□ -1.08
VTA1-205ENST00000620996 LRTM2Q8N967 370 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 C20orf24Q9BUV8 137 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 SIRT7Q9NRC8 400 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 LIN7CQ9NUP9 197 aaKnown RBP8.28□□□□□ -1.08
VTA1-205ENST00000620996 FBXL17Q9UF56 701 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 NSG2Q9Y328 171 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 AGPAT2O15120 278 aa8.28□□□□□ -1.08
VTA1-205ENST00000620996 ZNF737O75373 536 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms