RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 PLA2G5P39877 138 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 EDDM3BP56851 147 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 ZNF154Q13106 437 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 ZNF66Q6ZN08 573 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 ZNF705AQ6ZN79 300 aaPredicted RBP12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 ZNF695Q8IW36 515 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 KIAA1456Q9P272 454 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 TNRC6AQ8NDV7 1962 aaKnown RBP12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 IGHV3-43A0A0B4J1X8 118 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 IGHV3-43DP0DP04 118 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 IGHV1-2P23083 117 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 CXorf66Q5JRM2 361 aaPredicted RBP12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 NCR3LG1Q68D85 454 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 THNSL2Q86YJ6 484 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 ABHD17AQ96GS6 310 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 TM2D1Q9BX74 207 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 ZNF665Q9H7R5 613 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 PITPNC1Q9UKF7 332 aa12.28□□□□□ -0.44
SHROOM1-208ENST00000617339 PPYP01298 95 aa12.27□□□□□ -0.44
SHROOM1-208ENST00000617339 OR8B8Q15620 311 aa12.27□□□□□ -0.44
SHROOM1-208ENST00000617339 FAM185AQ8N0U4 392 aa12.27□□□□□ -0.44
SHROOM1-208ENST00000617339 C9orf106Q8NAJ2 232 aa12.27□□□□□ -0.44
SHROOM1-208ENST00000617339 BOD1Q96IK1 185 aa12.27□□□□□ -0.44
SHROOM1-208ENST00000617339 SYT3Q9BQG1 590 aa12.27□□□□□ -0.44
SHROOM1-208ENST00000617339 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.44
SHROOM1-208ENST00000617339 LRBAP50851 2863 aa12.27□□□□□ -0.45
SHROOM1-208ENST00000617339 A0A087WWC5 75 aa12.27□□□□□ -0.45
SHROOM1-208ENST00000617339 PPP1CBP62140 327 aa12.27□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF266Q14584 549 aa12.27□□□□□ -0.45
SHROOM1-208ENST00000617339 OR1K1Q8NGR3 316 aa12.27□□□□□ -0.45
SHROOM1-208ENST00000617339 OR5R1Q8NH85 324 aa12.27□□□□□ -0.45
SHROOM1-208ENST00000617339 FBLN5Q9UBX5 448 aa12.27□□□□□ -0.45
SHROOM1-208ENST00000617339 DFFBO76075 338 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 MPV17P39210 176 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 NKX2-1P43699 371 aaPredicted RBP12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 LIAT1Q6ZQX7 453 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 OR1P1Q8NH06 330 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 OR1A1Q9P1Q5 309 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 FAM90A27PA6NNH2 459 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 CEBPZOSA8MTT3 80 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 TUSC2O75896 110 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 CRYAAP02489 173 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 LINC00205P59089 165 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 RPP30P78346 268 aaKnown RBP12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 PRSS8Q16651 343 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 CEACAM21Q3KPI0 293 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 FAM58AQ8N1B3 248 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 GLRX2Q9NS18 164 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 HMGB3O15347 200 aaKnown RBP12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 SFTPCP11686 197 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 S100GP29377 79 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 IL13RA2Q14627 380 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 OR2Z1Q8NG97 314 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 CLDND2Q8NHS1 167 aa12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 TNRC6BQ9UPQ9 1833 aaKnown RBP12.26□□□□□ -0.45
SHROOM1-208ENST00000617339 A0A1W2PPQ1 181 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF705FA8MVS1 300 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF705DP0CH99 300 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF705BP0CI00 300 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 RAB4BP61018 213 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF818PQ6ZRF7 136 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 TBC1D26Q86UD7 250 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 DTD1Q8TEA8 209 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 NINJ1Q92982 152 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 NOL4LQ96MY1 436 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 LBHQ53QV2 105 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 BTNL3Q6UXE8 466 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 FAM214BQ7L5A3 538 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 PRDM14Q9GZV8 571 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 IGKV3D-15A0A087WSY6 115 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 NPSP0C0P6 89 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 PAX5Q02548 391 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 ARL6IP1Q15041 203 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 OR10A7Q8NGE5 316 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 TAAR6Q96RI8 345 aa12.25□□□□□ -0.45
SHROOM1-208ENST00000617339 FOXI3A8MTJ6 420 aaPredicted RBP12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 GNG3P63215 75 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 RTP5Q14D33 572 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 RNF151Q2KHN1 245 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 TEX38Q6PEX7 206 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 SLC35E3Q7Z769 313 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 TMEM252Q8N6L7 170 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 DCTN5Q9BTE1 182 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 RSG1Q9BU20 258 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 CREBBPQ92793 2442 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 DVL1O14640 695 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 HSPB1P04792 205 aaKnown RBP12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 CD33P20138 364 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 AESQ08117 197 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 ZNF506Q5JVG8 444 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 OR10V1Q8NGI7 309 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 BCL2L2Q92843 193 aaPredicted RBP12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 RAB24Q969Q5 203 aa12.24□□□□□ -0.45
SHROOM1-208ENST00000617339 RPUSD4Q96CM3 377 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms