RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ABCB10Q9NRK6 738 aa12.59□□□□□ -0.39
PCDHGC3-204ENST00000617222 MCUBQ9NWR8 336 aa12.59□□□□□ -0.39
PCDHGC3-204ENST00000617222 NSD1Q96L73 2696 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 IGHV3-72A0A0B4J1Y9 119 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 A0A1W2PPI3 338 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 M0R1X1 148 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 TIMM23O14925 209 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 FAUP35544 74 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 ARHGDIBP52566 201 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 BAMBIQ13145 260 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 LRRC75BQ2VPJ9 315 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 DRAM1Q8N682 238 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 FXYD6Q9H0Q3 95 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 TNFRSF19Q9NS68 423 aa12.58□□□□□ -0.4
PCDHGC3-204ENST00000617222 VGLL3A8MV65 326 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 TXNL1O43396 289 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 SLC22A5O76082 557 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 IGLV2-14P01704 120 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 IGHV4-59P01825 116 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 CT45A6P0DMU7 189 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 CT45A5P0DMU8 189 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 CT45A7P0DMV0 189 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 CD24P25063 80 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 BRS3P32247 399 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 IER3P46695 156 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 LINC00205P59089 165 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 AANATQ16613 207 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 AADACL3Q5VUY0 350 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 FAM71F2Q6NXP2 309 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 GLDNQ6ZMI3 551 aaPredicted RBP12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 LHFPL1Q86WI0 220 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 OR51S1Q8NGJ8 323 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 TERB2Q8NHR7 220 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 PIFOQ8TCI5 191 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 CAPSLQ8WWF8 208 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 NABP2Q9BQ15 211 aa12.57□□□□□ -0.4
PCDHGC3-204ENST00000617222 H3BUX3 64 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 PGAM2P15259 253 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 GNRHRP30968 328 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 DYNLT3P51808 116 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 SSMEM1Q8WWF3 244 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 DEDD2Q8WXF8 326 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 CFHR4Q92496 578 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 TSC22D3Q99576 134 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 PRRT1Q99946 306 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 DPAGT1Q9H3H5 408 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 SCP2D1Q9UJQ7 156 aa12.56□□□□□ -0.4
PCDHGC3-204ENST00000617222 BTBD17A6NE02 478 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 UPK1BO75841 260 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 UCP3P55916 312 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 SLC9A3R2Q15599 337 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 LY6EQ16553 131 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 LPCAT3Q6P1A2 487 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 IDO2Q6ZQW0 420 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 ZNF818PQ6ZRF7 136 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 ZBTB34Q8NCN2 500 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 RBMXL1Q96E39 390 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 AKR1E2Q96JD6 320 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 GPHA2Q96T91 129 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
PCDHGC3-204ENST00000617222 FAM90A9PA6NNJ1 464 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 PLA2G10O15496 165 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 TNFSF12O43508 249 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 SNRNP70P08621 437 aaKnown RBP12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 CD1BP29016 333 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 DUTP33316 252 aaKnown RBP12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 HILS1P60008 231 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 HNF4GQ14541 408 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 MSMO1Q15800 293 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 THNSL2Q86YJ6 484 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 ZDHHC22Q8N966 263 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 ZNF383Q8NA42 475 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 BVESQ8NE79 360 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 OR13C8Q8NGS7 320 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 MARCH1Q8TCQ1 289 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 MRGPRFQ96AM1 343 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 C7orf50Q9BRJ6 194 aaKnown RBP12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 RSRP1Q9BUV0 290 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 SLC2A8Q9NY64 477 aa12.54□□□□□ -0.4
PCDHGC3-204ENST00000617222 NAP1L6A6NFF2 107 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 CENPXA8MT69 81 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 H0YJW9 148 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 GPR31O00270 319 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 TCF21O43680 179 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 VENTXO95231 258 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 IFNA2P01563 188 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 IGKV1D-33P01593 117 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 IGKV1-33P01594 117 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 FAM106CPP0CH98 169 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 PI3P19957 117 aa12.53□□□□□ -0.4
PCDHGC3-204ENST00000617222 THBS3P49746 956 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms