RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 NPIPB4C9JG80 1138 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 F2Z2F3 143 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 TNFSF13O75888 250 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 UMODP07911 640 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 SSR4P51571 173 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 SUMO1P63165 101 aaKnown RBP11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 SLC38A11Q08AI6 406 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 GAGE1Q13065 139 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 NMSQ5H8A3 153 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 LEMD1Q68G75 181 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 UNQ5815/PRO19632Q6UWF5 114 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 SIGLECL1Q8N7X8 197 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 CLEC18CQ8NCF0 446 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 ETV2O00321 342 aaPredicted RBP11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 KITLGP21583 273 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 ZNF525Q8N782 197 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 TMEM56Q96MV1 263 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 TMEM56-RWDD3S4R434 201 aa11.41□□□□□ -0.58
PCDHA11-202ENST00000616325 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 TRAV1-1A0A0B4J248 108 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 CCL25O15444 150 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 PGLYRP1O75594 196 aaPredicted RBP11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 TUSC2O75896 110 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 NAPSAO96009 420 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 GDF1P27539 372 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 MSMO1Q15800 293 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 ADPRHL1Q8NDY3 354 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 SPSB1Q96BD6 273 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 ANAPC16Q96DE5 110 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 C11orf1Q9H5F2 150 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 CRIM1Q9NZV1 1036 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 IGLV3-19P01714 112 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 VHLLQ6RSH7 139 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 MBD3L1Q8WWY6 194 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 PSMF1Q92530 271 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 TAF15Q92804 592 aaKnown RBP eCLIP11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 NEIL1Q96FI4 390 aaPredicted RBP11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 PLPPR2Q96GM1 343 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 TECTBQ96PL2 329 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 ZNF552Q9H707 407 aaPredicted RBP11.4□□□□□ -0.58
PCDHA11-202ENST00000616325 EP300Q09472 2414 aaPredicted RBP11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 DIRC3C9JPN6 131 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 FCN1O00602 326 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 ZIC3O60481 467 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 SPATA45Q537H7 98 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 ZIC4Q8N9L1 334 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 APH1AQ96BI3 265 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 STARD4Q96DR4 205 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 RAB40CQ96S21 281 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 PRRG4Q9BZD6 226 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 RNF115Q9Y4L5 304 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 SELENOKQ9Y6D0 94 aa11.4□□□□□ -0.59
PCDHA11-202ENST00000616325 MDFIC2A0A1B0GVS7 189 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 SLC17A3O00476 420 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 SH2D1BO14796 132 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 IL6RP08887 468 aaPredicted RBP11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 IER3P46695 156 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 PDLIM4P50479 330 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 ACSM6Q6P461 480 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 LHFPL2Q6ZUX7 228 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 OR4C5Q8NGB2 326 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 WNT5BQ9H1J7 359 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 GPR35Q9HC97 309 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 SRFP11831 508 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 FOXG1P55316 489 aaPredicted RBP11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 RBM11P57052 281 aaKnown RBP11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 VAMP3Q15836 100 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 HIST3H3Q16695 136 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 MRPL21Q7Z2W9 205 aaKnown RBP11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 WDYHV1Q96HA8 205 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 ATG2AQ2TAZ0 1938 aa11.39□□□□□ -0.59
PCDHA11-202ENST00000616325 KRASP01116 189 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 P04436 131 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 LIFP15018 202 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 F2RP25116 425 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 AMTP48728 403 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 C3AR1Q16581 482 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 SAPCD1Q5SSQ6 148 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 WDR74Q6RFH5 385 aaPredicted RBP11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 OR10D3Q8NH80 312 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 WDR61Q9GZS3 305 aaKnown RBP11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 LOC102725191A0A1B0GVB3 256 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 SYNGR1O43759 233 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 ATP5G3P48201 142 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 HOXA4Q00056 320 aaPredicted RBP11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 OR5D13Q8NGL4 314 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 NGFP01138 241 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 IGHEP01854 428 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 UCP1P25874 307 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 FAM27BQ5VT28 67 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 PINX1Q96BK5 328 aaKnown RBP11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 TMEM38BQ9NVV0 291 aa11.38□□□□□ -0.59
PCDHA11-202ENST00000616325 TRAV38-1A0A0B4J264 116 aa11.37□□□□□ -0.59
PCDHA11-202ENST00000616325 PATE3B3GLJ2 98 aa11.37□□□□□ -0.59
PCDHA11-202ENST00000616325 SYNGR3O43761 229 aa11.37□□□□□ -0.59
PCDHA11-202ENST00000616325 FRMD6-AS1P0C7T7 363 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms