RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 NRG2O14511 850 aaPredicted RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 MT-CO3P00414 261 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 GRPP07492 148 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 ATP5L2Q7Z4Y8 100 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 F5H697 171 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 SCCPDHQ8NBX0 429 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 OR1L8Q8NGR8 309 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 CITED2Q99967 270 aaPredicted RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 XIRP1Q702N8 1843 aaKnown RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 ETHE1O95571 254 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 CCSMST1Q4G0I0 132 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 OCIAD2Q56VL3 154 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 LYZL2Q7Z4W2 148 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 A8MWV9 139 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 TSPAN2O60636 221 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 ZNF324O75467 553 aaPredicted RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 PTGER1P34995 402 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 HOXA4Q00056 320 aaPredicted RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 OR52E5Q8NH55 327 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 ZNF502Q8TBZ5 544 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 ASB10Q8WXI3 467 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 TMEM189A5PLL7 270 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 OTPQ5XKR4 325 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 CLDND2Q8NHS1 167 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 C20orf144Q9BQM9 153 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 NRN1Q9NPD7 142 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 ANKRD10Q9NXR5 420 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 PIAS3Q9Y6X2 628 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 RIPPLY3P57055 190 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 NGFP01138 241 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 TMEM252Q8N6L7 170 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 CNRIP1Q96F85 164 aaPredicted RBP7.66□□□□□ -1.18
TTC28-208ENST00000612946 HIGD1AQ9Y241 93 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 FREM1Q5H8C1 2179 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 INSL4Q14641 139 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 TMEM177Q53S58 311 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 AGBL5Q8NDL9 886 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 SPACA9Q96E40 222 aaPredicted RBP7.66□□□□□ -1.18
TTC28-208ENST00000612946 CD5P06127 495 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 BOD1L2Q8IYS8 172 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 ZNF735P0CB33 412 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 GZMMP51124 257 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 DSCR4P56555 118 aaPredicted RBP7.66□□□□□ -1.18
TTC28-208ENST00000612946 PSG9Q00887 426 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 ACSF3Q4G176 576 aaPredicted RBP7.66□□□□□ -1.18
TTC28-208ENST00000612946 GVQW1Q8N7I0 195 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 TMEM208Q9BTX3 173 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 SCNM1Q9BWG6 230 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 SERGEFQ9UGK8 458 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 A0A1W2PQD3 144 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 RPL36A-HNRNPH2H7BZ11 118 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 FCGR3BO75015 233 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 SCRG1O75711 98 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 ACRP10323 421 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 CAPZBP47756 277 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 MRAP2Q96G30 205 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 PLPP3O14495 311 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 CRYAAP02489 173 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 C10orf128Q5T292 105 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 SLC36A1Q7Z2H8 476 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 TPSD1Q9BZJ3 242 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 K7ESF4 209 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 HYPMO75409 117 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 SRP19P09132 144 aaKnown RBP7.66□□□□□ -1.18
TTC28-208ENST00000612946 NUP37Q8NFH4 326 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 Q8WTZ3 238 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 PLSCR4Q9NRQ2 329 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 PAPPAQ13219 1627 aa7.66□□□□□ -1.18
TTC28-208ENST00000612946 TRBV5-7A0A0A0MS05 114 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 TRAV8-2A0A0B4J237 113 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 A0A1B0GTI1 187 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 hADV38S2A0JD32 116 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 COLCA2A8K830 154 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 C1QAP02745 245 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 YAE1D1Q9NRH1 226 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 SAMD5Q5TGI4 173 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 CITED1Q99966 193 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 KCNE3Q9Y6H6 103 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 TRAV8-4A0A0B4J246 113 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 IZUMO1RA6ND01 250 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 SPRY1O43609 319 aaPredicted RBP7.65□□□□□ -1.18
TTC28-208ENST00000612946 CCL5P13501 91 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 OR10AC1Q8NH08 325 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 COX11Q9Y6N1 276 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 NPIPB6E9PJ23 425 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 PNLIPP16233 465 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 COL10A1Q03692 680 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 AKIRIN1Q9H9L7 192 aaPredicted RBP7.65□□□□□ -1.18
TTC28-208ENST00000612946 PXMP4Q9Y6I8 212 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 TICRRQ7Z2Z1 1910 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 LCTP09848 1927 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 GOSR1O95249 250 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 CDKN1BP46527 198 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 SAXO1Q8IYX7 474 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 PPIL1Q9Y3C6 166 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 RBP4P02753 201 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 ERVK11-1P61568 191 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 MGAT2Q10469 447 aa7.65□□□□□ -1.18
TTC28-208ENST00000612946 CEACAM16Q2WEN9 425 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms