RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 C12orf77C9JDV5 145 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 F2RL2O00254 374 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 C1QL1O75973 258 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 CFDP00746 253 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 NPY1RP25929 384 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ATP6V0CP27449 155 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 BRS3P32247 399 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 NDUFA6P56556 154 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ACP7Q6ZNF0 438 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 RNF144BQ7Z419 303 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 OR52M1Q8NGK5 317 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 OR13D1Q8NGV5 346 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 OR2T6Q8NHC8 308 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 SLC25A28Q96A46 364 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 RALYQ9UKM9 306 aaKnown RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 PRNDQ9UKY0 176 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ANKHD1Q8IWZ3 2542 aaKnown RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF705GA8MUZ8 300 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 LY86O95711 162 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 IL18BPO95998 194 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 HPRT1P00492 218 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 CT45A10P0DMU9 189 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ATP6V1FQ16864 119 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 DRAM1Q8N682 238 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 GPR146Q96CH1 333 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 OR51I2Q9H344 312 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 SLC2A8Q9NY64 477 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 CEP295Q9C0D2 2601 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF737O75373 536 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 CCL1P22362 96 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 HOXD11P31277 338 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 WNT5AP41221 380 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 DVL1P1P54792 670 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF90Q03938 601 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 C4orf17Q53FE4 359 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF429Q86V71 674 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 VKORC1L1Q8N0U8 176 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 GCSAMQ8N6F7 178 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF645Q8N7E2 425 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 OR1L8Q8NGR8 309 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 BLNKQ8WV28 456 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 TP53RKQ96S44 253 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 LPAR3Q9UBY5 353 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ATRXP46100 2492 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 PQLC2LA1A4F0 135 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 A1L4Q6 167 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 DVL1O14640 695 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 RGS13O14921 159 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 SNRPCP09234 159 aaKnown RBP6.17□□□□□ -1.42
CSDE1-218ENST00000610726 APOBEC3AP31941 199 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-218ENST00000610726 TBR1Q16650 682 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 C2orf68Q2NKX9 166 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 FAM78BQ5VT40 261 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 PEAR1Q5VY43 1037 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM65Q6PI78 240 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 SOSTQ9BQB4 213 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 TLN1Q9Y490 2541 aaKnown RBP6.17□□□□□ -1.42
CSDE1-218ENST00000610726 IGKV1-12A0A0C4DH73 117 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 DUXBA0A1W2PPF3 345 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 B9A039 149 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 IGKV1D-12P01611 117 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 MMP7P09237 267 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-218ENST00000610726 DAOP14920 347 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 RHOBP62745 196 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 PDZD11Q5EBL8 140 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 COMMD1Q8N668 190 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 SAT2Q96F10 170 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-218ENST00000610726 PROK2Q9HC23 129 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 THYN1Q9P016 225 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 TIMM9Q9Y5J7 89 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 MMP24Q9Y5R2 645 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 PPIAL4CA0A0B4J2A2 164 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 IQCF6A8MYZ5 107 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 CDK2AP1O14519 115 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 S1PR2O95136 353 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 PPIAL4GP0DN37 164 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 HLA-GP17693 338 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 LYZP61626 148 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 ETFRF1Q6IPR1 90 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 CLEC2AQ6UVW9 174 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF66Q6ZN08 573 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 OR13A1Q8NGR1 328 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF596Q8TC21 504 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 STARD4Q96DR4 205 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 RSG1Q9BU20 258 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 MRPL37Q9BZE1 423 aaKnown RBP6.17□□□□□ -1.42
CSDE1-218ENST00000610726 SLC35B3Q9H1N7 401 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 ZDHHC11Q9H8X9 412 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 SH2D2AQ9NP31 389 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM106BQ9NUM4 274 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 OR51B2Q9Y5P1 312 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 PRR14LQ5THK1 2151 aa6.17□□□□□ -1.42
CSDE1-218ENST00000610726 IGHV1-18A0A0C4DH31 117 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 DEDDO75618 318 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 EIF3GO75821 320 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ARG1P05089 322 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 BTCP35070 178 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ZP1P60852 638 aa6.16□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF345Q14585 488 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms