RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	SNRPD3	P62318	126 aa	Known RBP	3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	BTG1	P62324	171 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	GUCA2A	Q02747	115 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	GOLT1A	Q6ZVE7	132 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	ARRDC1	Q8N5I2	433 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	FAM216A	Q8WUB2	273 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	C20orf27	Q9GZN8	174 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	HILPDA	Q9Y5L2	63 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	PEX10	O60683	326 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	VSIG10L2	P0DP72	767 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	ANOS1	P23352	680 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	ASIP	P42127	132 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	PAPPA-AS1	Q5QFB9	102 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	SMIM19	Q96E16	107 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	RAX2	Q96IS3	184 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	FOXQ1	Q9C009	403 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	AKIP1	Q9NQ31	210 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	MED29	Q9NX70	200 aa		3.59	□□□□□ -1.83
KCNMA1-223	ENST00000604624	NAV1	Q8NEY1	1877 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624		A0A1W2PQM1	296 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	TYROBP	O43914	113 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	CLPS	P04118	112 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	TMPRSS3	P57727	454 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	EMC4	Q5J8M3	183 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GUSBP11	Q6P575	273 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	TMEM86B	Q8N661	226 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	ZNF346	Q9UL40	294 aa	Known RBP	3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	ANAPC10	Q9UM13	185 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	HS3ST3A1	Q9Y663	406 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	MYO9A	B2RTY4	2548 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GRIFIN	A4D1Z8	144 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624		H3BUT2	72 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	KLK10	O43240	276 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	SEC11B	P0C7V7	166 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	CD70	P32970	193 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	CX3CL1	P78423	397 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	AMER3	Q8N944	861 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GTF3A	Q92664	365 aa	Known RBP	3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	SIGLEC11	Q96RL6	698 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	UBE2Z	Q9H832	354 aa	Predicted RBP	3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	WDR54	Q9H977	334 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	OCIAD1	Q9NX40	245 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	KCNE5	Q9UJ90	142 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	TRAV17	A0A0B4J275	112 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624		A0A1B0GWA3	101 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	PRSS53	Q2L4Q9	553 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GPR27	Q9NS67	375 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	C1RL	Q9NZP8	487 aa		3.59	□□□□□ -1.84
KCNMA1-223	ENST00000604624	PLN	P26678	52 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	CDC20	Q12834	499 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	C9orf153	Q5TBE3	101 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GDF7	Q7Z4P5	450 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	ISCA2	Q86U28	154 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	TMEM25	Q86YD3	366 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	UBE2DNL	Q8IWF7	75 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	MRPL30	Q8TCC3	161 aa	Known RBP	3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	WDFY2	Q96P53	400 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	HIVEP2	P31629	2446 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	PGP	A6NDG6	321 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	CD8A	P01732	235 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	FUT6	P51993	359 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	POLR2G	P62487	172 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	FMOD	Q06828	376 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	FXYD3	Q14802	87 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	IGFBP7	Q16270	282 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	SAXO2	Q658L1	398 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GAGE2A	Q6NT46	116 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	MDS2	Q8NDY4	140 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	ARHGAP5-AS1	Q96IT6	56 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	PAXX	Q9BUH6	204 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	RNF39	Q9H2S5	420 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	ISG20L2	Q9H9L3	353 aa	Known RBP	3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	SLC17A5	Q9NRA2	495 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	SERGEF	Q9UGK8	458 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	CDC42EP3	Q9UKI2	254 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	SIT1	Q9Y3P8	196 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	POLR2I	P36954	125 aa	Known RBP	3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	DHRS2	Q13268	280 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	LINC00303	Q3SY05	128 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	FOXB2	Q5VYV0	432 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	RTL10	Q7L3V2	364 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	OR10S1	Q8NGN2	331 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	TMEM186	Q96B77	213 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	ZNF385A	Q96PM9	386 aa	Known RBP	3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	VAX2	Q9UIW0	290 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	EPDR1	Q9UM22	224 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624		A0A1W2PP11	408 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GAGE12J	A6NER3	117 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	IDS	B3KWA1	339 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	FAM72C	H0Y354	149 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	FGF5	P12034	268 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	SRI	P30626	198 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	HOXA6	P31267	233 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	APOBEC1	P41238	236 aa	Known RBP	3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GAGE1	Q13065	139 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GAGE4	Q13068	117 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GAGE5	Q13069	117 aa		3.58	□□□□□ -1.84
KCNMA1-223	ENST00000604624	GAGE6	Q13070	117 aa		3.58	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms