RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SORL1Q92673 2214 aa13.84□□□□□ -0.19
CHMP2A-208ENST00000601220 SOCS1O15524 211 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 IGHV3-11P01762 117 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 CDK1P06493 297 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 UCHL1P09936 223 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 LINC00205P59089 165 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 TMEM267Q0VDI3 215 aaPredicted RBP13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 ACTBL2Q562R1 376 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 RBM48Q5RL73 367 aaKnown RBP13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 MOB1BQ7L9L4 216 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 CEACAM19Q7Z692 300 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 TMED9Q9BVK6 235 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 RIMS4Q9H426 269 aaPredicted RBP13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 PLEKHJ1Q9NW61 149 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 AK3Q9UIJ7 227 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 TENM2Q9NT68 2774 aa13.83□□□□□ -0.2
CHMP2A-208ENST00000601220 LYSTQ99698 3801 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 IGKV1-6A0A0C4DH72 117 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 BPNT1O95861 308 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 IGKV1-16P04430 117 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 GSTP1P09211 210 aaKnown RBP13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 SCTP09683 121 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 OR8U9P0C7N5 309 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 CEACAM6P40199 344 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 TMEM50BP56557 158 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 SSBP2P81877 361 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 OGFRL1Q5TC84 451 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 PYHIN1Q6K0P9 492 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 UNQ5815/PRO19632Q6UWF5 114 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 Q8N1Y9 231 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 ZNF383Q8NA42 475 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 DRAXINQ8NBI3 349 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 LFNGQ8NES3 379 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 SETD6Q8TBK2 473 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 MS4A10Q96PG2 267 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 CLCC1Q96S66 551 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 CHMP1AQ9HD42 196 aaPredicted RBP13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 RNF150Q9ULK6 438 aa13.82□□□□□ -0.2
CHMP2A-208ENST00000601220 CSMD3Q7Z407 3707 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 DNAH1Q9P2D7 4330 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 CASQ2O14958 399 aaPredicted RBP13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 ARPC1BO15143 372 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 ZBTB25P24278 435 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 HLA-DRB3P79483 266 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 PLGLAQ15195 96 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 RCN1Q15293 331 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 HSD17B12Q53GQ0 312 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 OR6M1Q8NGM8 313 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 OR6Q1Q8NGQ2 317 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 MND1Q9BWT6 205 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 Q9N2K0 584 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 METTL1Q9UBP6 276 aaKnown RBP13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 HSF4Q9ULV5 492 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 STARD9Q9P2P6 4700 aa13.81□□□□□ -0.2
CHMP2A-208ENST00000601220 H7C2Y5 167 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 CA2P00918 260 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 IRF3Q14653 427 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 SPHARQ15513 63 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 TMEM91Q6ZNR0 172 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 ABHD5Q8WTS1 349 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 EDARADDQ8WWZ3 215 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 FLYWCH2Q96CP2 140 aaKnown RBP13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 SLA2Q9H6Q3 261 aa13.8□□□□□ -0.2
CHMP2A-208ENST00000601220 SPDEFO95238 335 aa13.79□□□□□ -0.2
CHMP2A-208ENST00000601220 IGLV1-51P01701 117 aa13.79□□□□□ -0.2
CHMP2A-208ENST00000601220 TPPP2P59282 170 aa13.79□□□□□ -0.2
CHMP2A-208ENST00000601220 P2RY14Q15391 338 aa13.79□□□□□ -0.2
CHMP2A-208ENST00000601220 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
CHMP2A-208ENST00000601220 TM2D3Q9BRN9 247 aa13.79□□□□□ -0.2
CHMP2A-208ENST00000601220 C19orf73Q9NVV2 129 aa13.79□□□□□ -0.2
CHMP2A-208ENST00000601220 PTGES3LE9PB15 166 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 SLC17A2O00624 439 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 IGLV2-23P01705 113 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 TFAP2AP05549 437 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 CRYGBP07316 175 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 CPEP16870 476 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 PITPNAQ00169 270 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 IL34Q6ZMJ4 242 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 ARHGAP5-AS1Q96IT6 56 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 OR4C12Q96R67 309 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 CITED4Q96RK1 184 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 TSNAXQ99598 290 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 URM1Q9BTM9 101 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 MGAT4AQ9UM21 535 aa13.78□□□□□ -0.2
CHMP2A-208ENST00000601220 A8MZ25 164 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 TRGV3P03979 118 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 ARSBP15848 533 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 RPS16P62249 146 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 FXYD3Q14802 87 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 PLAC9Q5JTB6 97 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 LIPKQ5VXJ0 399 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 PDPNQ86YL7 162 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 POC5Q8NA72 575 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 TMEM203Q969S6 136 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 PECRQ9BY49 303 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 C12orf4Q9NQ89 552 aa13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 AK6Q9Y3D8 172 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-208ENST00000601220 H3BUA1 57 aa13.76□□□□□ -0.21
CHMP2A-208ENST00000601220 LDLRAD4O15165 306 aa13.76□□□□□ -0.21
CHMP2A-208ENST00000601220 HSPA12AO43301 675 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms