RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 CABLES2Q9BTV7 478 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 ZMAT5Q9UDW3 170 aaKnown RBP12.56□□□□□ -0.4
SYMPK-213ENST00000599460 PLXNA2O75051 1894 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 SERTM2A0A1B0GWG4 89 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 P2RY4P51582 365 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 ZNF705AQ6ZN79 300 aaPredicted RBP12.56□□□□□ -0.4
SYMPK-213ENST00000599460 TM2D1Q9BX74 207 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 IGHV3-21A0A0B4J1V1 117 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 C20orf202A1L168 122 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 E9PLN8 166 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 CD74P04233 296 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 ERVFC1-1P60608 527 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 WBP1Q96G27 269 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 VKORC1Q9BQB6 163 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 GPR179Q6PRD1 2367 aa12.56□□□□□ -0.4
SYMPK-213ENST00000599460 ANKRD55Q3KP44 614 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 DPF1Q92782 380 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 FOXG1P55316 489 aaPredicted RBP12.55□□□□□ -0.4
SYMPK-213ENST00000599460 EFNB1P98172 346 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 POC1AQ8NBT0 407 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 LEUTXA8MZ59 168 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 FAM106CPP0CH98 169 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 ZNF818PQ6ZRF7 136 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
SYMPK-213ENST00000599460 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 CDRT15L2A8MXV6 281 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 SPP1P10451 314 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 OR10S1Q8NGN2 331 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 CHAC2Q8WUX2 184 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 RNF2Q99496 336 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 CHRDL1Q9BU40 450 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 CHODLQ9H9P2 273 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 ZNF788Q6ZQV5 615 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 POM121Q96HA1 1249 aa12.55□□□□□ -0.4
SYMPK-213ENST00000599460 UBE2L3P68036 154 aaKnown RBP12.54□□□□□ -0.4
SYMPK-213ENST00000599460 SELENOHQ8IZQ5 122 aaKnown RBP12.54□□□□□ -0.4
SYMPK-213ENST00000599460 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 TECRQ9NZ01 308 aaKnown RBP12.54□□□□□ -0.4
SYMPK-213ENST00000599460 RIF1Q5UIP0 2472 aaKnown RBP12.54□□□□□ -0.4
SYMPK-213ENST00000599460 PQLC2LA1A4F0 135 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 LIPFP07098 398 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 NHLH2Q02577 135 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 RHOVQ96L33 236 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 SMUG1Q53HV7 270 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 FAM78BQ5VT40 261 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 SLC24A4Q8NFF2 622 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 OR9G1Q8NH87 305 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 ZNF319Q9P2F9 582 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 IGHV1-18A0A0C4DH31 117 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 HTR1DP28221 377 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 TEPPQ6URK8 271 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 CLDN16Q9Y5I7 305 aa12.54□□□□□ -0.4
SYMPK-213ENST00000599460 DNASE2O00115 360 aaPredicted RBP12.53□□□□□ -0.4
SYMPK-213ENST00000599460 RPL27AP46776 148 aaKnown RBP12.53□□□□□ -0.4
SYMPK-213ENST00000599460 TPRP12270 2363 aaKnown RBP12.53□□□□□ -0.4
SYMPK-213ENST00000599460 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 TIMP3P35625 211 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
SYMPK-213ENST00000599460 OR4P4Q8NGL7 312 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 DEDDO75618 318 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 OR4X1Q8NH49 305 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 Q8WTZ3 238 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 GPR146Q96CH1 333 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 C17orf100A8MU93 164 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 ZNF345Q14585 488 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 FAM216BQ8N7L0 139 aa12.53□□□□□ -0.4
SYMPK-213ENST00000599460 CCL1P22362 96 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 NABP1Q96AH0 204 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 CLEC7AQ9BXN2 247 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 PARP11Q9NR21 331 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 IL36RNQ9UBH0 155 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 FANCMQ8IYD8 2048 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 TRBV23-1A0A0A0MS06 115 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 B3GALT5-AS1P59052 145 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 PNKDQ8N490 385 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 MRPL37Q9BZE1 423 aaKnown RBP12.52□□□□□ -0.4
SYMPK-213ENST00000599460 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.4
SYMPK-213ENST00000599460 MDC1Q14676 2089 aaKnown RBP12.52□□□□□ -0.4
SYMPK-213ENST00000599460 PITX3O75364 302 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 SPCS3P61009 180 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 B2MP61769 119 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 RPL8P62917 257 aaKnown RBP12.52□□□□□ -0.41
SYMPK-213ENST00000599460 CXorf66Q5JRM2 361 aaPredicted RBP12.52□□□□□ -0.41
SYMPK-213ENST00000599460 NR2C2APQ86WQ0 139 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 PDPNQ86YL7 162 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 KIAA1671Q9BY89 1806 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 TRAV20A0A0B4J274 112 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 GNG4P50150 75 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 PSG5Q15238 335 aa12.52□□□□□ -0.41
SYMPK-213ENST00000599460 C10orf113Q5VZT2 155 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms