RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 Q8N6K4 173 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 OR2T10Q8NGZ9 312 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 OR4F5Q8NH21 305 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 GIMAP1Q8WWP7 306 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 NPFFR1Q9GZQ6 430 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 C16orf95Q9H693 158 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 MTFP1Q9UDX5 166 aa16.25■□□□□ 0.19
PNKP-211ENST00000598020 IGHV3-72A0A0B4J1Y9 119 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 A0A1B0GUS0 222 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 A6NHS1 94 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 GABARAPH6UMI1 98 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 FCER2P06734 321 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 LUMP51884 338 aaPredicted RBP16.24■□□□□ 0.19
PNKP-211ENST00000598020 DHRS11Q6UWP2 260 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 OR5AN1Q8NGI8 311 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 OR52I2Q8NH67 350 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 EAF1Q96JC9 268 aaPredicted RBP16.24■□□□□ 0.19
PNKP-211ENST00000598020 SLC25A33Q9BSK2 321 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 OR2D2Q9H210 308 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 SDHAF2Q9NX18 166 aa16.24■□□□□ 0.19
PNKP-211ENST00000598020 ZNF736B4DX44 427 aaPredicted RBP16.23■□□□□ 0.19
PNKP-211ENST00000598020 M0QZK8 103 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 SLC22A5O76082 557 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 MOSP00540 346 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 TMEM11P17152 192 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 FCGR2CP31995 323 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 S100A5P33763 92 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 ACTBP60709 375 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 SSBP1Q04837 148 aaKnown RBP16.23■□□□□ 0.19
PNKP-211ENST00000598020 DYRK1AQ13627 763 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 HES1Q14469 280 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 Q8N2B8 174 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 OR4C13Q8NGP0 309 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 OR5H2Q8NGV7 314 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 FCAMRQ8WWV6 532 aa16.23■□□□□ 0.19
PNKP-211ENST00000598020 TAF15Q92804 592 aaKnown RBP eCLIP16.23■□□□□ 0.19
PNKP-211ENST00000598020 RBM7Q9Y580 266 aaKnown RBP16.23■□□□□ 0.19
PNKP-211ENST00000598020 OR5H14A6NHG9 310 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 RBBP9O75884 186 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 MC5RP33032 325 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 IL18Q14116 193 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 MSMO1Q15800 293 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 AWAT1Q58HT5 328 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 ZNF660Q6AZW8 331 aaPredicted RBP16.22■□□□□ 0.19
PNKP-211ENST00000598020 ZNF645Q8N7E2 425 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 OR8H1Q8NGG4 311 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 SPATA3Q8NHX4 192 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 SMIM4Q8WVI0 70 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 BEX1Q9HBH7 125 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 KLK11Q9UBX7 282 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 ZNF107Q9UII5 783 aaPredicted RBP16.22■□□□□ 0.19
PNKP-211ENST00000598020 MOB4Q9Y3A3 225 aa16.22■□□□□ 0.19
PNKP-211ENST00000598020 IGKV1D-13A0A0B4J2D9 117 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 CLPSL1A2RUU4 121 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 FABP12A6NFH5 140 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 H0YJW9 148 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 FGF16O43320 207 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 PPYP01298 95 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 IGKV1-13P0DP09 117 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 AADACP22760 399 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 HLA-DMAP28067 261 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 RFX2P48378 723 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 DGCR2P98153 550 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 HNF4GQ14541 408 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 ACTBL2Q562R1 376 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 LINC01006Q8NI28 216 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 C5orf30Q96GV9 206 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 EHFQ9NZC4 300 aa16.21■□□□□ 0.19
PNKP-211ENST00000598020 RBMX2Q9Y388 322 aaKnown RBP16.21■□□□□ 0.19
PNKP-211ENST00000598020 M0R1X1 148 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 GSTZ1O43708 216 aaPredicted RBP16.2■□□□□ 0.18
PNKP-211ENST00000598020 IGLV2-14P01704 120 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 PMP2P02689 132 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 AMY1AP04745 511 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 AMY2AP04746 511 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 TBPP20226 339 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 PTBP1P26599 531 aaKnown RBP eCLIP16.2■□□□□ 0.18
PNKP-211ENST00000598020 HRH1P35367 487 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 TAGLNQ01995 201 aaKnown RBP16.2■□□□□ 0.18
PNKP-211ENST00000598020 VAX1Q5SQQ9 334 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 C11orf88Q6PI97 169 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 CCDC190Q86UF4 302 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 ZNF383Q8NA42 475 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 OR6Q1Q8NGQ2 317 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 PRSS22Q9GZN4 317 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 ZNF702PQ9H963 129 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 PLSCR3Q9NRY6 295 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 STAB1Q9NY15 2570 aa16.2■□□□□ 0.18
PNKP-211ENST00000598020 MDKP21741 143 aaPredicted RBP16.19■□□□□ 0.18
PNKP-211ENST00000598020 ETV6P41212 452 aa16.19■□□□□ 0.18
PNKP-211ENST00000598020 BLCAPP62952 87 aa16.19■□□□□ 0.18
PNKP-211ENST00000598020 FAM131AQ6UXB0 335 aa16.19■□□□□ 0.18
PNKP-211ENST00000598020 GLDNQ6ZMI3 551 aaPredicted RBP16.19■□□□□ 0.18
PNKP-211ENST00000598020 DRAXINQ8NBI3 349 aaPredicted RBP16.19■□□□□ 0.18
PNKP-211ENST00000598020 ADTRPQ96IZ2 230 aa16.19■□□□□ 0.18
PNKP-211ENST00000598020 RNF5Q99942 180 aa16.19■□□□□ 0.18
PNKP-211ENST00000598020 WASHC3Q9Y3C0 194 aa16.19■□□□□ 0.18
PNKP-211ENST00000598020 DUTP33316 252 aaKnown RBP16.18■□□□□ 0.18
PNKP-211ENST00000598020 THBS3P49746 956 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 RNASE12Q5GAN4 147 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms