RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 C1orf123Q9NWV4 160 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 RASL12Q9NYN1 266 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 COMMD9Q9P000 198 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 MIOXQ9UGB7 285 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 PPP1R3CQ9UQK1 317 aa10.45□□□□□ -0.74
SCAF1-202ENST00000595242 FXYD6-FXYD2A0A087WZ82 144 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 IGKV1-6A0A0C4DH72 117 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 CENPVL3A0A0U1RRI6 287 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 TMEM178BH3BS89 294 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 IFNL4K9M1U5 179 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 TK1P04183 234 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 GRPP07492 148 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 ZNF44P15621 663 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 TNFSF4P23510 183 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 PAN3Q58A45 887 aaKnown RBP10.44□□□□□ -0.74
SCAF1-202ENST00000595242 ACP7Q6ZNF0 438 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 KCTD9Q7L273 389 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 LDLRAD3Q86YD5 345 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 ZNF680Q8NEM1 530 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 PLPPR1Q8TBJ4 325 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 PPP1R1CQ8WVI7 109 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 SLC2A9Q9NRM0 540 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 TENM2Q9NT68 2774 aa10.44□□□□□ -0.74
SCAF1-202ENST00000595242 A0A0D9SG52 128 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 K7EIL1 84 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 ARPC5O15511 151 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 OR2F2O95006 317 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 ZNF205O95201 554 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 HAND1O96004 215 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 SCTP09683 121 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 PIGPP57054 158 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 COL10A1Q03692 680 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 OR2F1Q13607 317 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 TMEM187Q14656 261 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 HMGN3Q15651 99 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 DEFB121Q5J5C9 76 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 PRAMEF6Q5VXH4 476 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 TMUB2Q71RG4 321 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 H1FOOQ8IZA3 346 aaPredicted RBP10.43□□□□□ -0.74
SCAF1-202ENST00000595242 KCNRGQ8N5I3 272 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 OR8H1Q8NGG4 311 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 RTN4IP1Q8WWV3 396 aaPredicted RBP10.43□□□□□ -0.74
SCAF1-202ENST00000595242 TOMM40LQ969M1 308 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 NEIL1Q96FI4 390 aaPredicted RBP10.43□□□□□ -0.74
SCAF1-202ENST00000595242 C2orf50Q96LR7 162 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 GLS2Q9UI32 602 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
SCAF1-202ENST00000595242 TEX13DA0A0J9YY54 714 aaPredicted RBP10.42□□□□□ -0.74
SCAF1-202ENST00000595242 A0A0U1RQK1 487 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 RNF222A6NCQ9 220 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 SIRPB1O00241 398 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 HSPB6O14558 160 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 ADAP1O75689 374 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 TOX4O94842 621 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 IFNA7P01567 189 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 PSMB6P28072 239 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 GATA4P43694 442 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 FXYD4P59646 89 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 SMIM21Q3B7S5 101 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 ABCA11PQ4W5N1 156 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 SLC35E4Q6ICL7 350 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 LIAT1Q6ZQX7 453 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 OR8B3Q8NGG8 313 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 ITLN1Q8WWA0 313 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 OR8B2Q96RD0 313 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 TBX15Q96SF7 602 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 MFFQ9GZY8 342 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 CLN8Q9UBY8 286 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 IL19Q9UHD0 177 aa10.42□□□□□ -0.74
SCAF1-202ENST00000595242 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 C5orf51A6NDU8 294 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.41□□□□□ -0.74
SCAF1-202ENST00000595242 GPR31O00270 319 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 ENSAO43768 121 aaKnown RBP10.41□□□□□ -0.74
SCAF1-202ENST00000595242 TSC22D2O75157 780 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 B3GALNT1O75752 331 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 S100A1P23297 94 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 HTR2BP41595 481 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 SRPXP78539 464 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 EXOSC2Q13868 293 aaKnown RBP10.41□□□□□ -0.74
SCAF1-202ENST00000595242 PRSS54Q6PEW0 395 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 ZNF826PQ6ZT77 177 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 ZNF546Q86UE3 836 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 THAP6Q8TBB0 222 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 CFHR4Q92496 578 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 SEC22AQ96IW7 307 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 MEGF10Q96KG7 1140 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 OR2V2Q96R30 315 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 TOLLIPQ9H0E2 274 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 GCM1Q9NP62 436 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 RDH8Q9NYR8 311 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 UBQLN2Q9UHD9 624 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 MAB21L2Q9Y586 359 aa10.41□□□□□ -0.74
SCAF1-202ENST00000595242 RPS10-NUDT3A0A1W2PQS6 291 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 TMEM30CPA0ZSE6 113 aa10.4□□□□□ -0.74
SCAF1-202ENST00000595242 A6NLC8 198 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms