RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 EDDM3AQ14507 147 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 TMEM200BQ69YZ2 307 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 LINC00596Q86U02 117 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 PRIMA1Q86XR5 153 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 ADAD2Q8NCV1 583 aaKnown RBP16.09■□□□□ 0.17
LSM4-203ENST00000593829 OR4A4PQ8NGN8 299 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 DCUN1D4Q92564 292 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 C1orf147Q96MC9 270 aaPredicted RBP16.09■□□□□ 0.17
LSM4-203ENST00000593829 AQP10Q96PS8 301 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 TRAV40A0A0B4J280 105 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 A0A1W2PP11 408 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 IFNA6P05013 189 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 IGHV4-38-2P0DP08 117 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 HRH1P35367 487 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 TMEM128Q5BJH2 165 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 PRSS54Q6PEW0 395 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 TMEM88Q6PEY1 159 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 VMO1Q7Z5L0 202 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 ARRDC1Q8N5I2 433 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 GLYATL2Q8WU03 294 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 C12orf57Q99622 126 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 UQCC1Q9NVA1 299 aa16.09■□□□□ 0.17
LSM4-203ENST00000593829 IGHV3OR16-10A0A075B7F0 116 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 C5orf51A6NDU8 294 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 TMEM14DPA8MWL7 114 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 GSTP1P09211 210 aaKnown RBP16.08■□□□□ 0.16
LSM4-203ENST00000593829 FOLR2P14207 255 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 VAMP1P23763 118 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 EIF5AP63241 154 aaKnown RBP16.08■□□□□ 0.16
LSM4-203ENST00000593829 MEF2CQ06413 473 aaPredicted RBP16.08■□□□□ 0.16
LSM4-203ENST00000593829 GPR157Q5UAW9 335 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 GVQW1Q8N7I0 195 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 Q8N7P7 452 aa16.08■□□□□ 0.16
LSM4-203ENST00000593829 GEMIN2O14893 280 aaKnown RBP16.07■□□□□ 0.16
LSM4-203ENST00000593829 SSX5O60225 188 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 OR7C1O76099 320 aaPredicted RBP16.07■□□□□ 0.16
LSM4-203ENST00000593829 VSIG8P0DPA2 414 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 FPR2P25090 351 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 KCTD9Q7L273 389 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 CBLN2Q8IUK8 224 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 OR10R2Q8NGX6 335 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 TERB2Q8NHR7 220 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 CASTOR1Q8WTX7 329 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 SMIM8Q96KF7 97 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 SELENOIQ9C0D9 397 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 METTL8Q9H825 291 aaKnown RBP16.07■□□□□ 0.16
LSM4-203ENST00000593829 GPR132Q9UNW8 380 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 JMJD1CQ15652 2540 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 TRAV24A0A0B4J272 114 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 hADV38S2A0JD32 116 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 CRTAPO75718 401 aaPredicted RBP16.07■□□□□ 0.16
LSM4-203ENST00000593829 SFT2D2O95562 160 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 RPL35P42766 123 aaKnown RBP16.07■□□□□ 0.16
LSM4-203ENST00000593829 MPV17LQ2QL34 196 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 OR52W1Q6IF63 320 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 TPRX1Q8N7U7 411 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 NUDCD2Q8WVJ2 157 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 LHX4Q969G2 390 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 SCGB3A2Q96PL1 93 aa16.07■□□□□ 0.16
LSM4-203ENST00000593829 H0YIZ8 118 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 AKR1C4P17516 323 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 BPIFB3P59826 476 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 EIF5AL1Q6IS14 154 aaKnown RBP16.06■□□□□ 0.16
LSM4-203ENST00000593829 TMEM104Q8NE00 496 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 C22orf15Q8WYQ4 148 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 RRNAD1Q96FB5 475 aaKnown RBP16.06■□□□□ 0.16
LSM4-203ENST00000593829 BANF2Q9H503 90 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 UNKLQ9H9P5 680 aaKnown RBP16.06■□□□□ 0.16
LSM4-203ENST00000593829 SIRT7Q9NRC8 400 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 RCC2Q9P258 522 aaKnown RBP16.06■□□□□ 0.16
LSM4-203ENST00000593829 POMT1Q9Y6A1 747 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 CENPVL3A0A0U1RRI6 287 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 hCG_1809904A0A1W2PP81 198 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 A0A1W2PPE2 198 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 A0A1W2PR64 198 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 A0A1W2PRV1 198 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 HSPB6O14558 160 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 TAAR5O14804 337 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 CAV2P51636 162 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 AKR1D1P51857 326 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 AESQ08117 197 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 FAM189A2Q15884 450 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 TAF9Q16594 264 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 OR4K15Q8NH41 348 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 TREM1Q9NP99 234 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 LINC00312Q9Y6C7 94 aa16.06■□□□□ 0.16
LSM4-203ENST00000593829 CCL3L1P16619 93 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 PRTN3P24158 256 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 NPBWR1P48145 328 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 MEOX2P50222 304 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 AKR1C2P52895 323 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 SRSF3P84103 164 aaKnown RBP16.05■□□□□ 0.16
LSM4-203ENST00000593829 AKR1C1Q04828 323 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 SUMF2Q8NBJ7 301 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 MARCH1Q8TCQ1 289 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 TMED6Q8WW62 240 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 ZNF581Q9P0T4 197 aa16.05■□□□□ 0.16
LSM4-203ENST00000593829 C13orf42A0A1B0GVH6 325 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 ZNF728P0DKX0 622 aa16.04■□□□□ 0.16
LSM4-203ENST00000593829 GLIPR1P48060 266 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms