RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 MAPK3P27361 379 aaPredicted RBP8.99□□□□□ -0.97
CLIP3-204ENST00000590559 PSG5Q15238 335 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 ACTBL2Q562R1 376 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 MOB1BQ7L9L4 216 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 FAM89BQ8N5H3 189 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 PACRGLQ8N7B6 248 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 LFNGQ8NES3 379 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 KCNG3Q8TAE7 436 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 CYGBQ8WWM9 190 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 IL1F10Q8WWZ1 152 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 FLYWCH2Q96CP2 140 aaKnown RBP8.99□□□□□ -0.97
CLIP3-204ENST00000590559 NEDD4LQ96PU5 975 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 TMEM59Q9BXS4 323 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 C11orf54Q9H0W9 315 aaPredicted RBP8.99□□□□□ -0.97
CLIP3-204ENST00000590559 KCNK15Q9H427 330 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 SLA2Q9H6Q3 261 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 ABRACLQ9P1F3 81 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 WASHC3Q9Y3C0 194 aa8.99□□□□□ -0.97
CLIP3-204ENST00000590559 LDLRAD4O15165 306 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 HSPA12AO43301 675 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 SPDEFO95238 335 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 BRI3O95415 125 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 CA2P00918 260 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 IGKV1-16P04430 117 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 TFAP2AP05549 437 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 TMEM50BP56557 158 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 LINC00205P59089 165 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 PITPNAQ00169 270 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 ACSM3Q53FZ2 586 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 RNLSQ5VYX0 342 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 UNQ5815/PRO19632Q6UWF5 114 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 IL34Q6ZMJ4 242 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 DHRSXQ8N5I4 330 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 MS4A15Q8N5U1 240 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 ZNF383Q8NA42 475 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 MS4A10Q96PG2 267 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 THAP7Q9BT49 309 aaPredicted RBP8.98□□□□□ -0.97
CLIP3-204ENST00000590559 LPAR5Q9H1C0 372 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 C8orf4Q9NR00 106 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 OR1A1Q9P1Q5 309 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 METTL1Q9UBP6 276 aaKnown RBP8.98□□□□□ -0.97
CLIP3-204ENST00000590559 RNF150Q9ULK6 438 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 A3GALT2U3KPV4 340 aa8.98□□□□□ -0.97
CLIP3-204ENST00000590559 TNCP24821 2201 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 IGKV1-6A0A0C4DH72 117 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 H3BUA1 57 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 MYL12BO14950 172 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 IGLV2-23P01705 113 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 CRYGBP07316 175 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
CLIP3-204ENST00000590559 SRMP19623 302 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 CEACAM6P40199 344 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 VEGFCP49767 419 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 TPPP2P59282 170 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 HLA-DRB3P79483 266 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 KLF5Q13887 457 aaPredicted RBP8.97□□□□□ -0.97
CLIP3-204ENST00000590559 SRSF7Q16629 238 aaKnown RBP eCLIP8.97□□□□□ -0.97
CLIP3-204ENST00000590559 GLT8D1Q68CQ7 371 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 AHSA2Q719I0 299 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 HAPLN4Q86UW8 402 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 EDARADDQ8WWZ3 215 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 OR4C12Q96R67 309 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 GFI1Q99684 422 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 HDHD3Q9BSH5 251 aaPredicted RBP8.97□□□□□ -0.97
CLIP3-204ENST00000590559 RIMS4Q9H426 269 aaPredicted RBP8.97□□□□□ -0.97
CLIP3-204ENST00000590559 AK3Q9UIJ7 227 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 HSF4Q9ULV5 492 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 STUB1Q9UNE7 303 aa8.97□□□□□ -0.97
CLIP3-204ENST00000590559 LSM2Q9Y333 95 aaKnown RBP8.97□□□□□ -0.97
CLIP3-204ENST00000590559 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.97
CLIP3-204ENST00000590559 H7C2Y5 167 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 SOCS1O15524 211 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 BPNT1O95861 308 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 SCTP09683 121 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 UCHL1P09936 223 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 ZBTB25P24278 435 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 PLGLAQ15195 96 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 MRGPRG-AS1Q2M3A8 158 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 POC5Q8NA72 575 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 DRAXINQ8NBI3 349 aaPredicted RBP8.96□□□□□ -0.98
CLIP3-204ENST00000590559 CLCC1Q96S66 551 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 TSNAXQ99598 290 aaKnown RBP8.96□□□□□ -0.98
CLIP3-204ENST00000590559 ELOVL1Q9BW60 279 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 RANGRFQ9HD47 186 aaPredicted RBP8.96□□□□□ -0.98
CLIP3-204ENST00000590559 Q9N2K0 584 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 PLEKHJ1Q9NW61 149 aa8.96□□□□□ -0.98
CLIP3-204ENST00000590559 TRGV3P03979 118 aa8.95□□□□□ -0.98
CLIP3-204ENST00000590559 MECP2P51608 486 aaKnown RBP8.95□□□□□ -0.98
CLIP3-204ENST00000590559 FXYD3Q14802 87 aa8.95□□□□□ -0.98
CLIP3-204ENST00000590559 MOGAT2Q3SYC2 334 aa8.95□□□□□ -0.98
CLIP3-204ENST00000590559 RBM48Q5RL73 367 aaKnown RBP8.95□□□□□ -0.98
CLIP3-204ENST00000590559 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
CLIP3-204ENST00000590559 C8orf59Q8N0T1 100 aaPredicted RBP8.95□□□□□ -0.98
CLIP3-204ENST00000590559 OR6M1Q8NGM8 313 aa8.95□□□□□ -0.98
CLIP3-204ENST00000590559 CHMP1AQ9HD42 196 aaPredicted RBP8.95□□□□□ -0.98
CLIP3-204ENST00000590559 SIGLEC8Q9NYZ4 499 aa8.95□□□□□ -0.98
CLIP3-204ENST00000590559 MGAT4AQ9UM21 535 aa8.95□□□□□ -0.98
CLIP3-204ENST00000590559 SLC17A2O00624 439 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 SLC25A17O43808 307 aa8.94□□□□□ -0.98
CLIP3-204ENST00000590559 RBMXL2O75526 392 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms