RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 LHFPL3Q86UP9 236 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 SPATA24Q86W54 205 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 OR5AN1Q8NGI8 311 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 KCNG3Q8TAE7 436 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 NRBF2Q96F24 287 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 USMG5Q96IX5 58 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 BANF2Q9H503 90 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 MBNL3Q9NUK0 354 aaKnown RBP9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 PIPOXQ9P0Z9 390 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 TP53TG1Q9Y2A0 90 aa9.46□□□□□ -0.9
NEDD4L-227ENST00000590020 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 AQP12BA6NM10 295 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 TMEM212A6NML5 194 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 RAB29O14966 203 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 ATF4P18848 351 aaPredicted RBP9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 KDM4DQ6B0I6 523 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 FAM71F2Q6NXP2 309 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 Q6ZWC4 215 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 AQP12AQ8IXF9 295 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 TMEM217Q8N7C4 229 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 FBLIM1Q8WUP2 373 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 RFKQ969G6 155 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 GALMQ96C23 342 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 RNF183Q96D59 192 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 TSNAXQ99598 290 aaKnown RBP9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 SPACA1Q9HBV2 294 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 AKIP1Q9NQ31 210 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 PAK1IP1Q9NWT1 392 aaPredicted RBP9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 TECRQ9NZ01 308 aaKnown RBP9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 MLXQ9UH92 298 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 UBQLN2Q9UHD9 624 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF230Q9UIE0 474 aaPredicted RBP9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 HSPG2P98160 4391 aa9.45□□□□□ -0.9
NEDD4L-227ENST00000590020 SC5DO75845 299 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 OR2C1O95371 312 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 GTF2A1P52655 376 aaPredicted RBP9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 APOC4P55056 127 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 RHOGP84095 191 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 TMED1Q13445 227 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF57Q68EA5 555 aaPredicted RBP9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 SIGIRRQ6IA17 410 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF383Q8NA42 475 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 OR8J1Q8NGP2 316 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 FAM46BQ96A09 425 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 PHB2Q99623 299 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF184Q99676 751 aaPredicted RBP9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 CIB1Q99828 191 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 RNF5Q99942 180 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 ALG8Q9BVK2 526 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 AASSQ9UDR5 926 aa9.44□□□□□ -0.9
NEDD4L-227ENST00000590020 ZNF780AO75290 641 aaPredicted RBP9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 PROP1O75360 226 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 IGLV2-23P01705 113 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 RPL35AP18077 110 aaKnown RBP9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 CBLN1P23435 193 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 BDKRB2P30411 391 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 FCGR2BP31994 310 aaPredicted RBP9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 ATP5G2Q06055 141 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 RBMS2Q15434 407 aaKnown RBP9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 LY6G6FQ5SQ64 297 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 GLIPR1L1Q6UWM5 242 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 ACBD7Q8N6N7 88 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 ADAD2Q8NCV1 583 aaKnown RBP9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 C2CD4CQ8TF44 421 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 THRSPQ92748 146 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 MUL1Q969V5 352 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 THTPAQ9BU02 230 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 SELENOIQ9C0D9 397 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 TMEM138Q9NPI0 162 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 ARGLU1Q9NWB6 273 aaPredicted RBP9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 STEAP1Q9UHE8 339 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 APLNQ9ULZ1 77 aa9.43□□□□□ -0.9
NEDD4L-227ENST00000590020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 IGLL5B9A064 214 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 G3V2T6 193 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 RTL8CO15255 209 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 SPDEFO95238 335 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 IGHV3-23P01764 117 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 IFNA4P05014 189 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 FUT3P21217 361 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 PPP3R1P63098 170 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 HMGN3Q15651 99 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 BTNL8Q6UX41 500 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 ZDHHC13Q8IUH4 622 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 C11orf45Q8TAV5 145 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 LGALS12Q96DT0 336 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 AGMATQ9BSE5 352 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 DMRT1Q9Y5R6 373 aa9.42□□□□□ -0.9
NEDD4L-227ENST00000590020 DEFB4AO15263 64 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 CA11O75493 328 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 CRTAPO75718 401 aaPredicted RBP9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 CRYGBP07316 175 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 FLOT2Q14254 428 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 GVQW1Q8N7I0 195 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 STPG3Q8N7X2 389 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 UXS1Q8NBZ7 420 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 OR13C5Q8NGS8 318 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 TMEM68Q96MH6 324 aa9.41□□□□□ -0.9
NEDD4L-227ENST00000590020 OR14A2Q96R54 314 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms