RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PRRT1Q99946 306 aa11□□□□□ -0.65
VMP1-210ENST00000589823 PRDM13Q9H4Q3 707 aa11□□□□□ -0.65
VMP1-210ENST00000589823 HRASLSQ9HDD0 168 aa11□□□□□ -0.65
VMP1-210ENST00000589823 SDHAF2Q9NX18 166 aa11□□□□□ -0.65
VMP1-210ENST00000589823 SCP2D1Q9UJQ7 156 aa11□□□□□ -0.65
VMP1-210ENST00000589823 GAB2Q9UQC2 676 aa11□□□□□ -0.65
VMP1-210ENST00000589823 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 LINC00854A0A1B0GVQ3 168 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 M0R1X1 148 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 ZNF735P0CB33 412 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 PGAM2P15259 253 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 ECI1P42126 302 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 BAMBIQ13145 260 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 MSMO1Q15800 293 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 AANATQ16613 207 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 ZBTB34Q8NCN2 500 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 OR51S1Q8NGJ8 323 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 TERB2Q8NHR7 220 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 SSMEM1Q8WWF3 244 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 SSX3Q99909 188 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 ZNF251Q9BRH9 671 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 C7orf50Q9BRJ6 194 aaKnown RBP10.99□□□□□ -0.65
VMP1-210ENST00000589823 MRPL20Q9BYC9 149 aaKnown RBP10.99□□□□□ -0.65
VMP1-210ENST00000589823 FXYD6Q9H0Q3 95 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 DPAGT1Q9H3H5 408 aa10.99□□□□□ -0.65
VMP1-210ENST00000589823 FN1P02751 2386 aaKnown RBP10.98□□□□□ -0.65
VMP1-210ENST00000589823 A0A1W2PPI3 338 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 NAP1L6A6NFF2 107 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 OR5H14A6NHG9 310 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 VGLL3A8MV65 326 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 TIMM23O14925 209 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 UPK1BO75841 260 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 DYNLT3P51808 116 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 UCP3P55916 312 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 TUSC1Q2TAM9 212 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 LHFPL1Q86WI0 220 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 DRAM1Q8N682 238 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 AKR1E2Q96JD6 320 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 NABP2Q9BQ15 211 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 CCL28Q9NRJ3 127 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 SLC2A8Q9NY64 477 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 MTORP42345 2549 aa10.98□□□□□ -0.65
VMP1-210ENST00000589823 TEP1Q99973 2627 aaKnown RBP10.97□□□□□ -0.65
VMP1-210ENST00000589823 H3BUX3 64 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 HOXA3O43365 443 aaPredicted RBP10.97□□□□□ -0.65
VMP1-210ENST00000589823 IFNA2P01563 188 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 S100GP29377 79 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 IER3P46695 156 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 AADACL3Q5VUY0 350 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 IDO2Q6ZQW0 420 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 SLC38A6Q8IZM9 456 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 TMEM86BQ8N661 226 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 OR5R1Q8NH85 324 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 ZFAND1Q8TCF1 268 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 CAPSLQ8WWF8 208 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 ADTRPQ96IZ2 230 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 PITPNC1Q9UKF7 332 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 POMT1Q9Y6A1 747 aa10.97□□□□□ -0.65
VMP1-210ENST00000589823 A0A0A6YYJ9 748 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 IGHV3-72A0A0B4J1Y9 119 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 GPR31O00270 319 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 TCF21O43680 179 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 PROP1O75360 226 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 IGHV4-59P01825 116 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 APOA2P02652 100 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 FAM106CPP0CH98 169 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 CT45A6P0DMU7 189 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 CT45A5P0DMU8 189 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 CT45A7P0DMV0 189 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 CD1BP29016 333 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 GNRHRP30968 328 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 THBS3P49746 956 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 RAB13P51153 203 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 HES1Q14469 280 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 ZNF66Q6ZN08 573 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 LURAP1LQ8IV03 231 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 DRAXINQ8NBI3 349 aaPredicted RBP10.96□□□□□ -0.65
VMP1-210ENST00000589823 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 CFHR4Q92496 578 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 C5orf30Q96GV9 206 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 SCGB3A2Q96PL1 93 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 HSD17B10Q99714 261 aaKnown RBP10.96□□□□□ -0.65
VMP1-210ENST00000589823 RSRP1Q9BUV0 290 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 TNFRSF19Q9NS68 423 aa10.96□□□□□ -0.65
VMP1-210ENST00000589823 LYRM1O43325 122 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 TNFSF12O43508 249 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 IGLV2-14P01704 120 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 SNRNP70P08621 437 aaKnown RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 CD24P25063 80 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 MC5RP33032 325 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 DUTP33316 252 aaKnown RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 HILS1P60008 231 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 TAGLNQ01995 201 aaKnown RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 CBX3Q13185 183 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 HABP2Q14520 560 aaPredicted RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 SURF2Q15527 256 aaPredicted RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 ABCA11PQ4W5N1 156 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms