RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ABCA11PQ4W5N1 156 aa16.07■□□□□ 0.16
DDX39A-207ENST00000588542 C5orf30Q96GV9 206 aa16.07■□□□□ 0.16
DDX39A-207ENST00000588542 OR2D2Q9H210 308 aa16.07■□□□□ 0.16
DDX39A-207ENST00000588542 PLSCR3Q9NRY6 295 aa16.07■□□□□ 0.16
DDX39A-207ENST00000588542 GAB2Q9UQC2 676 aa16.07■□□□□ 0.16
DDX39A-207ENST00000588542 MRPS7Q9Y2R9 242 aaKnown RBP16.07■□□□□ 0.16
DDX39A-207ENST00000588542 TRRAPQ9Y4A5 3859 aa16.06■□□□□ 0.16
DDX39A-207ENST00000588542 M0QZK8 103 aa16.06■□□□□ 0.16
DDX39A-207ENST00000588542 HAX1O00165 279 aa16.06■□□□□ 0.16
DDX39A-207ENST00000588542 FGF16O43320 207 aa16.06■□□□□ 0.16
DDX39A-207ENST00000588542 NFYAP23511 347 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-207ENST00000588542 LINC00205P59089 165 aa16.06■□□□□ 0.16
DDX39A-207ENST00000588542 GLDNQ6ZMI3 551 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-207ENST00000588542 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-207ENST00000588542 GPX8Q8TED1 209 aa16.06■□□□□ 0.16
DDX39A-207ENST00000588542 RITA1Q96K30 269 aa16.06■□□□□ 0.16
DDX39A-207ENST00000588542 SLIRPQ9GZT3 109 aaKnown RBP16.06■□□□□ 0.16
DDX39A-207ENST00000588542 TUSC2O75896 110 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 NAT1P18440 290 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 F2RL1P55085 397 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 ARPC4P59998 168 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 TMEM95Q3KNT9 176 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 SHISA2Q6UWI4 295 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 FAM131AQ6UXB0 335 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 SNX29P2Q8IUI4 249 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 LAX1Q8IWV1 398 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 Q8N9W7 124 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 DRAXINQ8NBI3 349 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-207ENST00000588542 OR5AN1Q8NGI8 311 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 CITED1Q99966 193 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 IFT46Q9NQC8 304 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 SDHAF2Q9NX18 166 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 EXTL2Q9UBQ6 330 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 ADAM30Q9UKF2 790 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 OR2W1Q9Y3N9 320 aa16.05■□□□□ 0.16
DDX39A-207ENST00000588542 H0YJW9 148 aa16.04■□□□□ 0.16
DDX39A-207ENST00000588542 ZNF383Q8NA42 475 aa16.04■□□□□ 0.16
DDX39A-207ENST00000588542 OR5AP2Q8NGF4 316 aa16.04■□□□□ 0.16
DDX39A-207ENST00000588542 IGKV1D-13A0A0B4J2D9 117 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 CCDC160A6NGH7 325 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 OR5H14A6NHG9 310 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 NCBP2LA6PVI3 153 aaKnown RBP16.03■□□□□ 0.16
DDX39A-207ENST00000588542 J3QRK9 145 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 M0R1X1 148 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 RGS5O15539 181 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 IGKV1-13P0DP09 117 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 VDAC2P45880 294 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-207ENST00000588542 FAM71E2Q8N5Q1 922 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 KLHDC1Q8N7A1 406 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 OR8H1Q8NGG4 311 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 WIPF2Q8TF74 440 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-207ENST00000588542 WNT10AQ9GZT5 417 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 NXF2Q9GZY0 626 aaKnown RBP16.03■□□□□ 0.16
DDX39A-207ENST00000588542 SCPEP1Q9HB40 452 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 NECAP2Q9NVZ3 263 aa16.03■□□□□ 0.16
DDX39A-207ENST00000588542 RSL24D1Q9UHA3 163 aaKnown RBP16.03■□□□□ 0.16
DDX39A-207ENST00000588542 RBM7Q9Y580 266 aaKnown RBP16.03■□□□□ 0.16
DDX39A-207ENST00000588542 CNTFRP26992 372 aa16.02■□□□□ 0.16
DDX39A-207ENST00000588542 LUMP51884 338 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-207ENST00000588542 ACTBP60709 375 aa16.02■□□□□ 0.16
DDX39A-207ENST00000588542 LYSMD2Q8IV50 215 aa16.02■□□□□ 0.16
DDX39A-207ENST00000588542 ABHD1Q96SE0 405 aa16.02■□□□□ 0.16
DDX39A-207ENST00000588542 ZNF701M0R085 212 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-207ENST00000588542 SULT1C2O00338 296 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 TPPPO94811 219 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 IGLV2-14P01704 120 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 OR5H8P0DN80 308 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 VSIG10L2P0DP72 767 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 FCGR2CP31995 323 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 MC5RP33032 325 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 CDK10Q15131 360 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 ARSJQ5FYB0 599 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-207ENST00000588542 C9orf152Q5JTZ5 239 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 ZNF645Q8N7E2 425 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 LIN7CQ9NUP9 197 aaKnown RBP16.01■□□□□ 0.15
DDX39A-207ENST00000588542 WASHC3Q9Y3C0 194 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 CMYA5Q8N3K9 4069 aa16.01■□□□□ 0.15
DDX39A-207ENST00000588542 PKD1L1Q8TDX9 2849 aa16■□□□□ 0.15
DDX39A-207ENST00000588542 AADACP22760 399 aa16■□□□□ 0.15
DDX39A-207ENST00000588542 MMDQ15546 238 aa16■□□□□ 0.15
DDX39A-207ENST00000588542 OVCH2Q7RTZ1 564 aa16■□□□□ 0.15
DDX39A-207ENST00000588542 NPBQ8NG41 125 aa16■□□□□ 0.15
DDX39A-207ENST00000588542 C6orf62Q9GZU0 229 aaPredicted RBP16■□□□□ 0.15
DDX39A-207ENST00000588542 TET2Q6N021 2002 aaPredicted RBP16■□□□□ 0.15
DDX39A-207ENST00000588542 PLXNB1O43157 2135 aa16■□□□□ 0.15
DDX39A-207ENST00000588542 VWFP04275 2813 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 H7C2Y5 167 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 NDUFA3O95167 84 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 IGHG2P01859 326 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 PMP2P02689 132 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 IGKV1-16P04430 117 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 DUTP33316 252 aaKnown RBP15.99■□□□□ 0.15
DDX39A-207ENST00000588542 RFX2P48378 723 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 ZNF660Q6AZW8 331 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-207ENST00000588542 OR52I2Q8NH67 350 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 MCFD2Q8NI22 146 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 GIMAP1Q8WWP7 306 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 DCUN1D5Q9BTE7 237 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 EHFQ9NZC4 300 aa15.99■□□□□ 0.15
DDX39A-207ENST00000588542 LINC01548A6NM66 108 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms