RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PTX4Q96A99 478 aa8.15□□□□□ -1.1
RFFL-209ENST00000581265 ABHD14BQ96IU4 210 aa8.15□□□□□ -1.1
RFFL-209ENST00000581265 CITED4Q96RK1 184 aa8.15□□□□□ -1.1
RFFL-209ENST00000581265 TMEM59Q9BXS4 323 aa8.15□□□□□ -1.1
RFFL-209ENST00000581265 PARP12Q9H0J9 701 aaKnown RBP8.15□□□□□ -1.1
RFFL-209ENST00000581265 C11orf54Q9H0W9 315 aaPredicted RBP8.15□□□□□ -1.1
RFFL-209ENST00000581265 ZMAT4Q9H898 229 aa8.15□□□□□ -1.1
RFFL-209ENST00000581265 GAB2Q9UQC2 676 aa8.15□□□□□ -1.1
RFFL-209ENST00000581265 A3GALT2U3KPV4 340 aa8.15□□□□□ -1.1
RFFL-209ENST00000581265 TMEM14DPA8MWL7 114 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 A8MZ25 164 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 H7C2Y5 167 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 MYL12BO14950 172 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 SLC22A1O15245 554 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 IGLV1-51P01701 117 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 IGHV3-11P01762 117 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 TFAP2AP05549 437 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 SRMP19623 302 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 ZBTB25P24278 435 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 CEACAM6P40199 344 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 PITPNAQ00169 270 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 UNC119Q13432 240 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 RNLSQ5VYX0 342 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 UNQ5815/PRO19632Q6UWF5 114 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 AHSA2Q719I0 299 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 MOB1BQ7L9L4 216 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 FAM89BQ8N5H3 189 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 ABHD5Q8WTS1 349 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 EDARADDQ8WWZ3 215 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 MS4A10Q96PG2 267 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 TM2D3Q9BRN9 247 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 NICN1Q9BSH3 213 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 FAM103A1Q9BTL3 118 aaKnown RBP8.14□□□□□ -1.11
RFFL-209ENST00000581265 C19orf73Q9NVV2 129 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 PLEKHJ1Q9NW61 149 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 FKBP14Q9NWM8 211 aa8.14□□□□□ -1.11
RFFL-209ENST00000581265 METTL1Q9UBP6 276 aaKnown RBP8.14□□□□□ -1.11
RFFL-209ENST00000581265 LDLRAD4O15165 306 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 HSPA12AO43301 675 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 SPDEFO95238 335 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 BPNT1O95861 308 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 GNAO1P09471 354 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 TPPP2P59282 170 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 C8orf59Q8N0T1 100 aaPredicted RBP8.13□□□□□ -1.11
RFFL-209ENST00000581265 BPIFB6Q8NFQ5 453 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 CLCC1Q96S66 551 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 TSNAXQ99598 290 aaKnown RBP8.13□□□□□ -1.11
RFFL-209ENST00000581265 ELOVL1Q9BW60 279 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 LPAR5Q9H1C0 372 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 CHMP1AQ9HD42 196 aaPredicted RBP8.13□□□□□ -1.11
RFFL-209ENST00000581265 RANGRFQ9HD47 186 aaPredicted RBP8.13□□□□□ -1.11
RFFL-209ENST00000581265 HSF4Q9ULV5 492 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 MGAT4AQ9UM21 535 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 STUB1Q9UNE7 303 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 TNCP24821 2201 aa8.13□□□□□ -1.11
RFFL-209ENST00000581265 A0A0A6YYD4 124 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 FOXI3A8MTJ6 420 aaPredicted RBP8.12□□□□□ -1.11
RFFL-209ENST00000581265 H3BUA1 57 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 EBAG9O00559 213 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 SOCS1O15524 211 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 BRI3O95415 125 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 CA2P00918 260 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 TRGV3P03979 118 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 IGKV1-16P04430 117 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 SCTP09683 121 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 IGHV4-30-4P0DP06 118 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 SNRPBP14678 240 aaKnown RBP8.12□□□□□ -1.11
RFFL-209ENST00000581265 CPEP16870 476 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 ZP3P21754 424 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 RPS16P62249 146 aaKnown RBP8.12□□□□□ -1.11
RFFL-209ENST00000581265 FXYD3Q14802 87 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 SRSF7Q16629 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
RFFL-209ENST00000581265 RBM48Q5RL73 367 aaKnown RBP8.12□□□□□ -1.11
RFFL-209ENST00000581265 CEACAM19Q7Z692 300 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 ZNF383Q8NA42 475 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 DRAXINQ8NBI3 349 aaPredicted RBP8.12□□□□□ -1.11
RFFL-209ENST00000581265 OR6M1Q8NGM8 313 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 SETD6Q8TBK2 473 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 URM1Q9BTM9 101 aaKnown RBP8.12□□□□□ -1.11
RFFL-209ENST00000581265 TMED9Q9BVK6 235 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 KCNK15Q9H427 330 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 EDA2RQ9HAV5 297 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 Q9N2K0 584 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 OR1A1Q9P1Q5 309 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 AK3Q9UIJ7 227 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 ZNF221Q9UK13 617 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
RFFL-209ENST00000581265 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 CDK1P06493 297 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 UCHL1P09936 223 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 LGALS7P47929 136 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 TMEM50BP56557 158 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 LINC00205P59089 165 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 HLA-DRB3P79483 266 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
RFFL-209ENST00000581265 KLF5Q13887 457 aaPredicted RBP8.11□□□□□ -1.11
RFFL-209ENST00000581265 SPHARQ15513 63 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 MOGAT2Q3SYC2 334 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 HSD17B12Q53GQ0 312 aa8.11□□□□□ -1.11
RFFL-209ENST00000581265 IL34Q6ZMJ4 242 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms