RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 SH2D2AQ9NP31 389 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 LYRM2Q9NU23 88 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-206ENST00000578373 SNURFLB1AK76 121 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 PTBP3O95758 552 aaKnown RBP10.32□□□□□ -0.76
ERBB2-206ENST00000578373 TAF15Q92804 592 aaKnown RBP eCLIP10.32□□□□□ -0.76
ERBB2-206ENST00000578373 TSC2P49815 1807 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 PRR14LQ5THK1 2151 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 IGHV3-72A0A0B4J1Y9 119 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 FOSL1P15407 271 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 TCTAP57738 103 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 FOXC1Q12948 553 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 ATP6V1FQ16864 119 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 LRRC10Q5BKY1 277 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 MIC13Q5XKP0 118 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 OR4S2Q8NH73 311 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 FKBP11Q9NYL4 201 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 OR5I1Q13606 314 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 SLC24A4Q8NFF2 622 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 DNASE2BQ8WZ79 361 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 SLC45A2Q9UMX9 530 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 FAM208BQ5VWN6 2430 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 HELZP42694 1942 aaKnown RBP10.31□□□□□ -0.76
ERBB2-206ENST00000578373 GBF1Q92538 1859 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 DNPH1O43598 174 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 GLIPR1P48060 266 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 MRPL13Q9BYD1 178 aaKnown RBP10.31□□□□□ -0.76
ERBB2-206ENST00000578373 CXorf65A6NEN9 183 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 NCBP2LA6PVI3 153 aaKnown RBP10.31□□□□□ -0.76
ERBB2-206ENST00000578373 H0Y980 276 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 IGHMP01871 453 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 TFF1P04155 84 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 NPY1RP25929 384 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 CD1BP29016 333 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 UCP2P55851 309 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 KIAA1644Q3SXP7 199 aa10.31□□□□□ -0.76
ERBB2-206ENST00000578373 NOL4LQ96MY1 436 aaPredicted RBP10.31□□□□□ -0.76
ERBB2-206ENST00000578373 TECRQ9NZ01 308 aaKnown RBP10.31□□□□□ -0.76
ERBB2-206ENST00000578373 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
ERBB2-206ENST00000578373 FGF5P12034 268 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 PRDX2P32119 198 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 SSTR5P35346 364 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 RTP5Q14D33 572 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 ZNF385CQ66K41 422 aaPredicted RBP10.3□□□□□ -0.76
ERBB2-206ENST00000578373 ABHD12Q8N2K0 398 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 ZNF581Q9P0T4 197 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 PITPNC1Q9UKF7 332 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 S1PR2O95136 353 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 CYC1P08574 325 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 LINC00271P0C7V0 271 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 GZMHP20718 246 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 PAX6P26367 422 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 VMA21Q3ZAQ7 101 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 OR1B1Q8NGR6 318 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 SIGLEC12Q96PQ1 595 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 SIRT7Q9NRC8 400 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 FGF11Q92914 225 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 LYZL4Q96KX0 146 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 TMEM56Q96MV1 263 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 OR6C3Q9NZP0 311 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 PTPRQQ9UMZ3 2332 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 CRYABP02511 175 aaKnown RBP10.3□□□□□ -0.76
ERBB2-206ENST00000578373 MARS2Q96GW9 593 aaKnown RBP10.3□□□□□ -0.76
ERBB2-206ENST00000578373 CCL13Q99616 98 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 DCTN5Q9BTE1 182 aa10.3□□□□□ -0.76
ERBB2-206ENST00000578373 IGKV1D-13A0A0B4J2D9 117 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 IGKV1-13P0DP09 117 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 ZNF137PP52743 207 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 CCL20P78556 96 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 NHLRC2Q8NBF2 726 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 ZNF524Q96C55 264 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 OPN3Q9H1Y3 402 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-206ENST00000578373 MYOZ1Q9NP98 299 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-206ENST00000578373 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 LINC00587B1AMM8 73 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 FOXG1P55316 489 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-206ENST00000578373 LYZP61626 148 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 RANP62826 216 aaKnown RBP10.29□□□□□ -0.76
ERBB2-206ENST00000578373 TNXAQ16473 311 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 NFAM1Q8NET5 270 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-206ENST00000578373 FGFBP3Q8TAT2 258 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 HARBI1Q96MB7 349 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 TBX15Q96SF7 602 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 GRIFINA4D1Z8 144 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 HELTA6NFD8 242 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 B4DEV8 164 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 J3QR06 171 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 SRSF10O75494 262 aaKnown RBP10.29□□□□□ -0.76
ERBB2-206ENST00000578373 PPP1R32Q7Z5V6 425 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 DRAM1Q8N682 238 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 OR2T6Q8NHC8 308 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 FLYWCH2Q96CP2 140 aaKnown RBP10.29□□□□□ -0.76
ERBB2-206ENST00000578373 VPS25Q9BRG1 176 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 MANBALQ9NQG1 85 aa10.29□□□□□ -0.76
ERBB2-206ENST00000578373 ELOA3CA0A087WX78 387 aaPredicted RBP10.28□□□□□ -0.76
ERBB2-206ENST00000578373 FAM90A27PA6NNH2 459 aa10.28□□□□□ -0.76
ERBB2-206ENST00000578373 CYB5R3P00387 301 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms