RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 LUMP51884 338 aaPredicted RBP12.13□□□□□ -0.47
LITAF-217ENST00000575426 PROK1P58294 105 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 Q8N2B8 174 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 OR5AP2Q8NGF4 316 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 C15orf40Q8WUR7 153 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 SCPEP1Q9HB40 452 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 RSL24D1Q9UHA3 163 aaKnown RBP12.13□□□□□ -0.47
LITAF-217ENST00000575426 GAB2Q9UQC2 676 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 OR2W1Q9Y3N9 320 aa12.13□□□□□ -0.47
LITAF-217ENST00000575426 OR5H14A6NHG9 310 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 M0R1X1 148 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 SLC22A5O76082 557 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 APOA2P02652 100 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 CT45A6P0DMU7 189 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 CT45A5P0DMU8 189 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 CT45A7P0DMV0 189 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 VSIG10L2P0DP72 767 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 WFDC12Q8WWY7 111 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 RASL11BQ9BPW5 248 aa12.12□□□□□ -0.47
LITAF-217ENST00000575426 C6orf62Q9GZU0 229 aaPredicted RBP12.12□□□□□ -0.47
LITAF-217ENST00000575426 SULT1C2O00338 296 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 CTDSP2O14595 271 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 TPPPO94811 219 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 OR5H8P0DN80 308 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 CBX3Q13185 183 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 CDK10Q15131 360 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 FAM131AQ6UXB0 335 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
LITAF-217ENST00000575426 Q8N6K4 173 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 C5orf56Q8N8D9 126 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 DRAXINQ8NBI3 349 aaPredicted RBP12.11□□□□□ -0.47
LITAF-217ENST00000575426 SDHAF2Q9NX18 166 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
LITAF-217ENST00000575426 ZNF701M0R085 212 aaPredicted RBP12.1□□□□□ -0.47
LITAF-217ENST00000575426 AMY1AP04745 511 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 AMY2AP04746 511 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 FCGR2CP31995 323 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 TAS2R46P59540 309 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 ACTBP60709 375 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
LITAF-217ENST00000575426 MMDQ15546 238 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 Q6ZS46 218 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 LAX1Q8IWV1 398 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 KLHDC1Q8N7A1 406 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 GPX8Q8TED1 209 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 SNAPC3Q92966 411 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 DIRAS2Q96HU8 199 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 ADTRPQ96IZ2 230 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 MIXL1Q9H2W2 232 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 LIN7CQ9NUP9 197 aaKnown RBP12.1□□□□□ -0.47
LITAF-217ENST00000575426 EHFQ9NZC4 300 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 KIAA1456Q9P272 454 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 RABL2AQ9UBK7 228 aaPredicted RBP12.1□□□□□ -0.47
LITAF-217ENST00000575426 RABL2BQ9UNT1 228 aa12.1□□□□□ -0.47
LITAF-217ENST00000575426 TET2Q6N021 2002 aaPredicted RBP12.1□□□□□ -0.47
LITAF-217ENST00000575426 SH2D7A6NKC9 451 aaPredicted RBP12.09□□□□□ -0.47
LITAF-217ENST00000575426 H0YJW9 148 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 RBBP9O75884 186 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 PMP2P02689 132 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 NAT1P18440 290 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 RCVRNP35243 200 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 THBS3P49746 956 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 F2RL1P55085 397 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 CENPVQ7Z7K6 275 aaPredicted RBP12.09□□□□□ -0.47
LITAF-217ENST00000575426 PDPNQ86YL7 162 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 Q8N9W7 124 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 OR5AN1Q8NGI8 311 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 FCAMRQ8WWV6 532 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 RNF5Q99942 180 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 DCUN1D5Q9BTE7 237 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 SLIRPQ9GZT3 109 aaKnown RBP12.09□□□□□ -0.47
LITAF-217ENST00000575426 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 NDUFA13Q9P0J0 144 aa12.09□□□□□ -0.47
LITAF-217ENST00000575426 NBR2O15453 112 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 PROP1O75360 226 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 TUSC2O75896 110 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 RRASP10301 218 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 HLA-DMAP28067 261 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 HERV-K104P61576 105 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 RPS16P62249 146 aaKnown RBP12.08□□□□□ -0.48
LITAF-217ENST00000575426 RNASE12Q5GAN4 147 aaKnown RBP12.08□□□□□ -0.48
LITAF-217ENST00000575426 SLC35E3Q7Z769 313 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 ZNF383Q8NA42 475 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 GIMAP1Q8WWP7 306 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 RBM38Q9H0Z9 239 aaKnown RBP12.08□□□□□ -0.48
LITAF-217ENST00000575426 PLSCR3Q9NRY6 295 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 ANAPC10Q9UM13 185 aa12.08□□□□□ -0.48
LITAF-217ENST00000575426 PPYP01298 95 aa12.07□□□□□ -0.48
LITAF-217ENST00000575426 AADACP22760 399 aa12.07□□□□□ -0.48
LITAF-217ENST00000575426 RFX2P48378 723 aa12.07□□□□□ -0.48
LITAF-217ENST00000575426 FXYD4P59646 89 aa12.07□□□□□ -0.48
LITAF-217ENST00000575426 TSPAN5P62079 268 aa12.07□□□□□ -0.48
LITAF-217ENST00000575426 SRSF4Q08170 494 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms