RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MRPL18Q9H0U6 180 aaKnown RBP12.19□□□□□ -0.46
SMG6-215ENST00000574501 TUBG2Q9NRH3 451 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 MTCH1Q9NZJ7 389 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 KCNS2Q9ULS6 477 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 RBM7Q9Y580 266 aaKnown RBP12.19□□□□□ -0.46
SMG6-215ENST00000574501 MDFIC2A0A1B0GVS7 189 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 SH2D1BO14796 132 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 COX5AP20674 150 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 KITLGP21583 273 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 FGF12P61328 243 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 SRSF7Q16629 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMG6-215ENST00000574501 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 GCSAMLQ5JQS6 135 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 ETFRF1Q6IPR1 90 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 TMEM14EPQ6UXP3 125 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 CPEB3Q8NE35 698 aaKnown RBP12.19□□□□□ -0.46
SMG6-215ENST00000574501 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 ESPL1Q14674 2120 aa12.19□□□□□ -0.46
SMG6-215ENST00000574501 TRBV20OR9-2A0A075B6H5 130 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 WDR1O75083 606 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 CBR3O75828 277 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 CD99P14209 185 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 CCR5P51681 352 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 SELENOTP62341 195 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 MRPS21P82921 87 aaKnown RBP12.18□□□□□ -0.46
SMG6-215ENST00000574501 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 LEMD1Q68G75 181 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 TIPARPQ7Z3E1 657 aaKnown RBP12.18□□□□□ -0.46
SMG6-215ENST00000574501 OR1L6Q8NGR2 347 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 YLPM1P49750 1951 aaKnown RBP12.18□□□□□ -0.46
SMG6-215ENST00000574501 IGHV1OR21-1A0A087WYE8 117 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 TRAV38-1A0A0B4J264 116 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 F6UZH7 168 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 ZFAND5O76080 213 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 CEACAM8P31997 349 aaPredicted RBP12.18□□□□□ -0.46
SMG6-215ENST00000574501 ZNF90Q03938 601 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 AGBL5Q8NDL9 886 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 PSMF1Q92530 271 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 TECTBQ96PL2 329 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 CELSR3Q9NYQ7 3312 aa12.18□□□□□ -0.46
SMG6-215ENST00000574501 SLC17A3O00476 420 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 KRASP01116 189 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 CCNOP22674 350 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
SMG6-215ENST00000574501 Q6ZN92 141 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FGFRL1Q8N441 504 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 SIGLECL1Q8N7X8 197 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 OR56B2PQ8NGI1 322 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 SPACA9Q96E40 222 aaPredicted RBP12.17□□□□□ -0.46
SMG6-215ENST00000574501 TXN2Q99757 166 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 SRXN1Q9BYN0 137 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 TMEM38BQ9NVV0 291 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A10PA6NDY2 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A18PA6NE21 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A16PA6NEW6 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A20PA6NIJ5 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A8PA6NJQ4 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A7PA6NKC0 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A22PA8MWA6 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A12PA8MX19 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A5PA8MXJ8 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A23PA8MXZ1 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 C10orf142B7Z368 130 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 TMPRSS2O15393 492 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A15PP0C7V4 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A13PP0C7W8 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A14PP0C7W9 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 FAM90A24PP0C7X0 464 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 CDC34P49427 236 aaPredicted RBP12.17□□□□□ -0.46
SMG6-215ENST00000574501 SPINK9Q5DT21 86 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 Q8N976 141 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 OR4B1Q8NGF8 309 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 STRADBQ9C0K7 418 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 OR2H1Q9GZK4 316 aa12.17□□□□□ -0.46
SMG6-215ENST00000574501 COL6A3P12111 3177 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 A0A0J9YW62 118 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 NKX6-3A6NJ46 265 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 FCN1O00602 326 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 SYNGR1O43759 233 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 PDE6DO43924 150 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 VAMP5O95183 116 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 TIAF1O95411 115 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 ESDP10768 282 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 IER3P46695 156 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 Q8NFD4 153 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 GAL3ST2Q9H3Q3 398 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 SLC45A2Q9UMX9 530 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 LAMTOR2Q9Y2Q5 125 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 CHCHD2Q9Y6H1 151 aaPredicted RBP12.16□□□□□ -0.46
SMG6-215ENST00000574501 TRAPPC2LH3BP13 241 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 CCL2P13500 99 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms