RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 C11orf94C9JXX5 98 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 J3QLW9 94 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 ITGB1BP1O14713 200 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 XRCC3O43542 346 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 GGCTO75223 188 aaKnown RBP6.46□□□□□ -1.38
SMG1-216ENST00000569122 TRBV12-3P01733 135 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 APOA2P02652 100 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 ZNF19P17023 458 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 FUT3P21217 361 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 DAPP51397 102 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 MS4A2Q01362 244 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 RIPK1Q13546 671 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 MED22Q15528 200 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 DEFB135Q30KP9 77 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 FAM106AQ4KMX7 169 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 SLC22A6Q4U2R8 563 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 TM4SF20Q53R12 229 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 TMEM177Q53S58 311 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 SLC25A30Q5SVS4 291 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 DMRTA1Q5VZB9 504 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 DMKNQ6E0U4 476 aaPredicted RBP6.46□□□□□ -1.38
SMG1-216ENST00000569122 OR4A47Q6IF82 309 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 RBPMS2Q6ZRY4 209 aaKnown RBP6.46□□□□□ -1.38
SMG1-216ENST00000569122 PDPNQ86YL7 162 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 ACBD7Q8N6N7 88 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 ADAD2Q8NCV1 583 aaKnown RBP6.46□□□□□ -1.38
SMG1-216ENST00000569122 CANT1Q8WVQ1 401 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 PHB2Q99623 299 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 C6orf62Q9GZU0 229 aaPredicted RBP6.46□□□□□ -1.38
SMG1-216ENST00000569122 ZNF581Q9P0T4 197 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.38
SMG1-216ENST00000569122 PKHD1P08F94 4074 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.45□□□□□ -1.38
SMG1-216ENST00000569122 B2RBV5 119 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 M0R129 80 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 BMPR1BO00238 502 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 SC5DO75845 299 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 CBLN1P23435 193 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 CBX3Q13185 183 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 EXOSC2Q13868 293 aaKnown RBP6.45□□□□□ -1.38
SMG1-216ENST00000569122 GNMTQ14749 295 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 DDI2Q5TDH0 399 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 NR2C2APQ86WQ0 139 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 GPHB5Q86YW7 130 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 CENPSQ8N2Z9 138 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 OR2C3Q8N628 320 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 OR1L6Q8NGR2 347 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 TRUB1Q8WWH5 349 aaKnown RBP6.45□□□□□ -1.38
SMG1-216ENST00000569122 EDARADDQ8WWZ3 215 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 MARC2Q969Z3 335 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 C4orf36Q96KX1 117 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 IFI27L2Q9H2X8 130 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 FBXL17Q9UF56 701 aa6.45□□□□□ -1.38
SMG1-216ENST00000569122 EXOSC1Q9Y3B2 195 aaKnown RBP6.45□□□□□ -1.38
SMG1-216ENST00000569122 IGLL5B9A064 214 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 MPPED1O15442 326 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 DCTN3O75935 186 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 SCTP09683 121 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 OR9G9P0C7N8 305 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 GSTT2P0CG29 244 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 GSTT2BP0CG30 244 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 BDKRB2P30411 391 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 RHOGP84095 191 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 TAGLNQ01995 201 aaKnown RBP6.44□□□□□ -1.38
SMG1-216ENST00000569122 RPL39P5Q59GN2 51 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 GLDNQ6ZMI3 551 aaPredicted RBP6.44□□□□□ -1.38
SMG1-216ENST00000569122 SLC25A42Q86VD7 318 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 TMEM61Q8N0U2 210 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 SYS1Q8N2H4 156 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 NECAP1Q8NC96 275 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 GPR148Q8TDV2 347 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 IL1F10Q8WWZ1 152 aa6.44□□□□□ -1.38
SMG1-216ENST00000569122 PARP12Q9H0J9 701 aaKnown RBP6.44□□□□□ -1.38
SMG1-216ENST00000569122 C11orf68Q9H3H3 251 aaKnown RBP6.44□□□□□ -1.38
SMG1-216ENST00000569122 G3V2T6 193 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 H3BNX3 289 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 J3QRE1 110 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 ST8SIA5O15466 376 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 FKBP6O75344 327 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 SCAF4O95104 1147 aaKnown RBP6.43□□□□□ -1.38
SMG1-216ENST00000569122 IGKV1-16P04430 117 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 ADMP35318 185 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 GBX2P52951 348 aaPredicted RBP6.43□□□□□ -1.38
SMG1-216ENST00000569122 SOHLH1Q5JUK2 328 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 MEDAGQ5VYS4 303 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 FAM46BQ96A09 425 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 CCDC124Q96CT7 223 aaKnown RBP6.43□□□□□ -1.38
SMG1-216ENST00000569122 GALNT14Q96FL9 552 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 NSL1Q96IY1 281 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 RARRES2Q99969 163 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 AKIP1Q9NQ31 210 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 TAS2R4Q9NYW5 299 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 CKLFQ9UBR5 152 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 ZNF230Q9UIE0 474 aaPredicted RBP6.43□□□□□ -1.38
SMG1-216ENST00000569122 ZNF221Q9UK13 617 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 APLNQ9ULZ1 77 aa6.43□□□□□ -1.38
SMG1-216ENST00000569122 TRBV9A0A0B4J1U6 114 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 UBE2QL1A1L167 161 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 ZNF320A2RRD8 509 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 CREBL2O60519 120 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms