RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 OR56B4Q8NH76 319 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 OR9G1Q8NH87 305 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 CT45A3Q8NHU0 189 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 UPRTQ96BW1 309 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 YPEL2Q96QA6 119 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 SLC6A7Q99884 636 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 ZNF2Q9BSG1 426 aaPredicted RBP6.28□□□□□ -1.4
SMG1-214ENST00000568038 CLEC7AQ9BXN2 247 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 C11orf54Q9H0W9 315 aaPredicted RBP6.28□□□□□ -1.4
SMG1-214ENST00000568038 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 UNKLQ9H9P5 680 aaKnown RBP6.28□□□□□ -1.4
SMG1-214ENST00000568038 HRASLSQ9HDD0 168 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 MCUBQ9NWR8 336 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 ZNF107Q9UII5 783 aaPredicted RBP6.28□□□□□ -1.4
SMG1-214ENST00000568038 RNF150Q9ULK6 438 aa6.28□□□□□ -1.4
SMG1-214ENST00000568038 MYO9AB2RTY4 2548 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 A0A087X0M5 115 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 IGHV1-69DA0A0B4J2H0 117 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 A0A1B0GX30 115 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 J3QR06 171 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 DIRAS3O95661 229 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 IGHV1-69P01742 117 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 OR8U9P0C7N5 309 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 ZNF735P0CB33 412 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 IGHV4-38-2P0DP08 117 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 TBPP20226 339 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 AADACP22760 399 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 CD34P28906 385 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 FAUP35544 74 aaKnown RBP6.27□□□□□ -1.41
SMG1-214ENST00000568038 UBE2E1P51965 193 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 PRRX1P54821 245 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 LGALS4P56470 323 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 HERV-K104P61576 105 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 IFITM3Q01628 133 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 MEF2DQ14814 521 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 HLA-DRB5Q30154 266 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 KLF17Q5JT82 389 aaPredicted RBP6.27□□□□□ -1.41
SMG1-214ENST00000568038 VAX1Q5SQQ9 334 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 FAM120AOSQ5T036 256 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 C16orf87Q6PH81 154 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 DHRS11Q6UWP2 260 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 BRD3OSQ6XYD6 125 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 SLC25A48Q6ZT89 311 aaKnown RBP6.27□□□□□ -1.41
SMG1-214ENST00000568038 TMEM17Q86X19 198 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 LYG1Q8N1E2 194 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 ZNF439Q8NDP4 499 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 OR2AK2Q8NG84 335 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 OR51S1Q8NGJ8 323 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 OR10X1Q8NGY0 326 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 OR6F1Q8NGZ6 308 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 OR8U1Q8NH10 309 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 NANPQ8TBE9 248 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 GIMAP1Q8WWP7 306 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 ST8SIA2Q92186 375 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 BORCS5Q969J3 196 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 CREB3L1Q96BA8 519 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 ABHD14AQ9BUJ0 271 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 OR2W1Q9Y3N9 320 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 DMRT1Q9Y5R6 373 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 CENPEQ02224 2701 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 ITPR2Q14571 2701 aa6.27□□□□□ -1.41
SMG1-214ENST00000568038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.415e-7■■■■■ 47.2
SMG1-214ENST00000568038 FLNBO75369 2602 aaKnown RBP6.27□□□□□ -1.41
SMG1-214ENST00000568038 IGKV1D-13A0A0B4J2D9 117 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 CENPXA8MT69 81 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 DISC1C4P0D8 188 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 NPFFO15130 113 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 PLA2G10O15496 165 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 TUSC2O75896 110 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 PPYP01298 95 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 IGKV1-13P0DP09 117 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 SRP14P37108 136 aaKnown RBP6.26□□□□□ -1.41
SMG1-214ENST00000568038 RAB7AP51149 207 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 LUMP51884 338 aaPredicted RBP6.26□□□□□ -1.41
SMG1-214ENST00000568038 CD69Q07108 199 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 LY6G6FQ5SQ64 297 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 ZNF626Q68DY1 528 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 ZNF660Q6AZW8 331 aaPredicted RBP6.26□□□□□ -1.41
SMG1-214ENST00000568038 LHFPL4Q7Z7J7 247 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 ARRDC1Q8N5I2 433 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 OR11H6Q8NGC7 330 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 OR4P4Q8NGL7 312 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 ZNF596Q8TC21 504 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 SECTM1Q8WVN6 248 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 C17orf50Q8WW18 174 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 TOMM40LQ969M1 308 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 ABHD14BQ96IU4 210 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 SLC5A7Q9GZV3 580 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 TOLLIPQ9H0E2 274 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 OR2D2Q9H210 308 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 MMP28Q9H239 520 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 HILPDAQ9Y5L2 63 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 SOX21Q9Y651 276 aaPredicted RBP6.26□□□□□ -1.41
SMG1-214ENST00000568038 ASH1LQ9NR48 2969 aaKnown RBP6.26□□□□□ -1.41
SMG1-214ENST00000568038 CSPG4Q6UVK1 2322 aa6.26□□□□□ -1.41
SMG1-214ENST00000568038 OR5H14A6NHG9 310 aa6.25□□□□□ -1.41
SMG1-214ENST00000568038 ODF3BA8MYP8 253 aa6.25□□□□□ -1.41
SMG1-214ENST00000568038 BUB1B-PAK6H3BSN5 160 aa6.25□□□□□ -1.41
SMG1-214ENST00000568038 ITGB1BP1O14713 200 aa6.25□□□□□ -1.41
SMG1-214ENST00000568038 HSD17B6O14756 317 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms