RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MPTX1A8MV57 137 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 C15orf65H3BRN8 121 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 FGF16O43320 207 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 CCL3L1P16619 93 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 PRTN3P24158 256 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 EIF5AL1Q6IS14 154 aaKnown RBP10.34□□□□□ -0.75
SF3B3-206ENST00000565990 FAM185AQ8N0U4 392 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 OR5H2Q8NGV7 314 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 NEK7Q8TDX7 302 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 TNFRSF14Q92956 283 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 MRGPRFQ96AM1 343 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 LINC00052Q96N35 136 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 GSX1Q9H4S2 264 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-206ENST00000565990 C7orf69Q9H7B7 122 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 ZMAT3Q9HA38 289 aaKnown RBP10.34□□□□□ -0.75
SF3B3-206ENST00000565990 CHMP1AQ9HD42 196 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-206ENST00000565990 MXRA5Q9NR99 2828 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 SVEP1Q4LDE5 3571 aa10.34□□□□□ -0.75
SF3B3-206ENST00000565990 F8P00451 2351 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 TOX4O94842 621 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 SPDEFO95238 335 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 RLN2P04090 185 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 ERVFRD-1P60508 538 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 PRSS54Q6PEW0 395 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 TRAT1Q6PIZ9 186 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 CLEC9AQ6UXN8 241 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 HEPN1Q6WQI6 88 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 Q6ZS49 121 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 OR10A7Q8NGE5 316 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 NUDCD2Q8WVJ2 157 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 ZNF714Q96N38 554 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 CMSS1Q9BQ75 279 aaKnown RBP10.33□□□□□ -0.76
SF3B3-206ENST00000565990 GAL3ST2Q9H3Q3 398 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 Q9N2K0 584 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 YAE1D1Q9NRH1 226 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 TRAPPC2LQ9UL33 140 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 KCNS2Q9ULS6 477 aa10.33□□□□□ -0.76
SF3B3-206ENST00000565990 A0A087X0M5 115 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 TRAV39A0A0B4J263 110 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 A0A1B0GX30 115 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 hCG_1809904A0A1W2PP81 198 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 A0A1W2PPE2 198 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 A0A1W2PR64 198 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 A0A1W2PRV1 198 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 C12orf77C9JDV5 145 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 FSHBP01225 129 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 IGHV1-8P0DP01 117 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 RCC1P18754 421 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-206ENST00000565990 DTYMKP23919 212 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 SLC38A6Q8IZM9 456 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 MARC2Q969Z3 335 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 SAT2Q96F10 170 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-206ENST00000565990 C2orf50Q96LR7 162 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 AQP10Q96PS8 301 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 TBX15Q96SF7 602 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 ZNF471Q9BX82 626 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-206ENST00000565990 METTL8Q9H825 291 aaKnown RBP10.32□□□□□ -0.76
SF3B3-206ENST00000565990 C12orf4Q9NQ89 552 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 ZFP57Q9NU63 452 aa10.32□□□□□ -0.76
SF3B3-206ENST00000565990 F2RL2O00254 374 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 MMP23AO75900 390 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 FCGR3AP08637 254 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 LUMP51884 338 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-206ENST00000565990 ARFRP1Q13795 201 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 HMGN3Q15651 99 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 FAM120AOSQ5T036 256 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 HCP5Q6MZN7 132 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 FAM122CQ6P4D5 195 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 IL34Q6ZMJ4 242 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 VMO1Q7Z5L0 202 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 GVQW1Q8N7I0 195 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 OR5AP2Q8NGF4 316 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 OR52M1Q8NGK5 317 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 MRGPRDQ8TDS7 321 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 RNF141Q8WVD5 230 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 HDHD3Q9BSH5 251 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-206ENST00000565990 CALYQ9NYX4 217 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 KCNIP1Q9NZI2 227 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 ONECUT1Q9UBC0 465 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 POMT1Q9Y6A1 747 aa10.31□□□□□ -0.76
SF3B3-206ENST00000565990 CENPVL3A0A0U1RRI6 287 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 MEX3AA1L020 520 aaKnown RBP10.3□□□□□ -0.76
SF3B3-206ENST00000565990 C5orf51A6NDU8 294 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 TRDCB7Z8K6 153 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 CTSDP07339 412 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-206ENST00000565990 VAMP1P23763 118 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 LOXL3P58215 753 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 BPIFB3P59826 476 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 HTD2P86397 168 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-206ENST00000565990 OR52W1Q6IF63 320 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 MOB1BQ7L9L4 216 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 BAP18Q8IXM2 172 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 TEX29Q8N6K0 151 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 MARCH1Q8TCQ1 289 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 ARL11Q969Q4 196 aa10.3□□□□□ -0.76
SF3B3-206ENST00000565990 KIRREL1Q96J84 757 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms