RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ANGPT4Q9Y264 503 aa4.02□□□□□ -1.77
VPS35P1-201ENST00000563400 TP53TG5Q9Y2B4 290 aa4.02□□□□□ -1.77
VPS35P1-201ENST00000563400 FAM32AQ9Y421 112 aaKnown RBP4.02□□□□□ -1.77
VPS35P1-201ENST00000563400 ORC6Q9Y5N6 252 aa4.02□□□□□ -1.77
VPS35P1-201ENST00000563400 KCNE3Q9Y6H6 103 aa4.02□□□□□ -1.77
VPS35P1-201ENST00000563400 ANKRD12Q6UB98 2062 aa4.02□□□□□ -1.77
VPS35P1-201ENST00000563400 CEP250Q9BV73 2442 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 A0A087WW49 117 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 A0A096LPI6 279 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 PHYHO14832 338 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 AGPAT2O15120 278 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 C6orf47O95873 294 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 DBIP07108 87 aaKnown RBP4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 GNB3P16520 340 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 RCC1P18754 421 aaPredicted RBP4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 GABRA3P34903 492 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 SMIM11AP58511 58 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 RPS23P62266 143 aaKnown RBP4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 BTG2P78543 158 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 APOFQ13790 326 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 EDDM3AQ14507 147 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 LTB4RQ15722 352 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 HIST3H3Q16695 136 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 IGFL2Q6UWQ7 119 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 SHISA6Q6ZSJ9 500 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 C6orf120Q7Z4R8 191 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 GALNT10Q86SR1 603 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 PRIMA1Q86XR5 153 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 CLVS1Q8IUQ0 354 aaPredicted RBP4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 FDCSPQ8NFU4 85 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 SLC26A10Q8NG04 563 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 OR52R1Q8NGF1 315 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 OR8J3Q8NGG0 315 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF519Q8TB69 540 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 IL22RA2Q969J5 263 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 C18orf12Q96KH6 178 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 FAM210BQ96KR6 192 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 SLC35G5Q96KT7 338 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 CCDC115Q96NT0 180 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 HIST1H4GQ99525 98 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 SULT4A1Q9BR01 284 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 MROQ9BYG7 248 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 TRIM4Q9C037 500 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 OR11A1Q9GZK7 315 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 OR51E2Q9H255 320 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 TXNIPQ9H3M7 391 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 MYOZ1Q9NP98 299 aaPredicted RBP4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 SAR1AQ9NR31 198 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 DNAJC27Q9NZQ0 273 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 RPS6KB2Q9UBS0 482 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 UFC1Q9Y3C8 167 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 UGT2A1Q9Y4X1 527 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 HEATR5BQ9P2D3 2071 aa4.01□□□□□ -1.77
VPS35P1-201ENST00000563400 A0A1W2PQD3 144 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR6C6A6NF89 314 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 SMIM1B2RUZ4 78 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 HCRTR1O43613 425 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR2J2O76002 312 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 IGKV3-11P04433 115 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 CRHP06850 196 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TFPTP0C1Z6 253 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 CXCL3P19876 107 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 FOXA1P55317 472 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 RAB25P57735 213 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ERVFC1-1P60608 527 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 PSG4Q00888 419 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 REG3AQ06141 175 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 FHL1Q13642 323 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TTC32Q5I0X7 151 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 CLEC12AQ5QGZ9 265 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 HIST2H3PS2Q5TEC6 136 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 KDM4DQ6B0I6 523 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TNFAIP8L2Q6P589 184 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 UNQ9370/PRO34162Q6UXP9 181 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 GDPGP1Q6ZNW5 385 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 Q6ZS92 163 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 LINC00173Q6ZV60 143 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 AQP11Q8NBQ7 271 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR1L8Q8NGR8 309 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR9A2Q8NGT5 310 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 OR13D1Q8NGV5 346 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF563Q8TA94 476 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF721Q8TF20 911 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 FAM3DQ96BQ1 224 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 NEURL3Q96EH8 262 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 METTL26Q96S19 204 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 C1orf50Q9BV19 199 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TMED9Q9BVK6 235 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ZNF717Q9BY31 904 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 SLC25A39Q9BZJ4 359 aaPredicted RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 POLR2J2Q9GZM3 115 aaKnown RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 POLR2J3Q9H1A7 115 aaKnown RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 SPNS1Q9H2V7 528 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 TPT1P8Q9HAU6 139 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ENY2Q9NPA8 101 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 CLCF1Q9UBD9 225 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 LSM5Q9Y4Y9 91 aaKnown RBP4□□□□□ -1.77
VPS35P1-201ENST00000563400 DOCK7Q96N67 2140 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 MYLKQ15746 1914 aa4□□□□□ -1.77
VPS35P1-201ENST00000563400 ACACAQ13085 2346 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms