RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 DYNC2LI1Q8TCX1 351 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 ACOT12Q8WYK0 555 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 SNAPC3Q92966 411 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 PHF21AQ96BD5 680 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 AKR1E2Q96JD6 320 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 S1PR3Q99500 378 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 GHITMQ9H3K2 345 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 ANAPC10Q9UM13 185 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 CEPT1Q9Y6K0 416 aa6.77□□□□□ -1.33
UBR1-204ENST00000563239 MGAM2Q2M2H8 2515 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 IGKV1D-13A0A0B4J2D9 117 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 MEIS3P1A6NDR6 274 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 H0YJW9 148 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 H3BMQ9 156 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 TUSC2O75896 110 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 IGLV2-14P01704 120 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 IGHG2P01859 326 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 FCER2P06734 321 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 LPLP06858 475 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 IGKV1-13P0DP09 117 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 VSIG10L2P0DP72 767 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 NFYAP23511 347 aaPredicted RBP6.76□□□□□ -1.33
UBR1-204ENST00000563239 VDAC2P45880 294 aaPredicted RBP6.76□□□□□ -1.33
UBR1-204ENST00000563239 LINC01559Q495D7 138 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 TMEM69Q5SWH9 247 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 C10orf99Q6UWK7 81 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 FAM131AQ6UXB0 335 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 DRAXINQ8NBI3 349 aaPredicted RBP6.76□□□□□ -1.33
UBR1-204ENST00000563239 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.76□□□□□ -1.33
UBR1-204ENST00000563239 BEST4Q8NFU0 473 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 RAB2BQ8WUD1 216 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 ISOC1Q96CN7 298 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 BCL7BQ9BQE9 202 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 GINS4Q9BRT9 223 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 OR2D2Q9H210 308 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 MIXL1Q9H2W2 232 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 SDHAF2Q9NX18 166 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 MEGF8Q7Z7M0 2845 aa6.76□□□□□ -1.33
UBR1-204ENST00000563239 NCBP2LA6PVI3 153 aaKnown RBP6.75□□□□□ -1.33
UBR1-204ENST00000563239 ADARB2-AS1A8MUL3 147 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 CTDSP2O14595 271 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 CTXN2P0C2S0 81 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 CD28P10747 220 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 NAT1P18440 290 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 GPR12P47775 334 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 ACTBP60709 375 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 EIF4EBP1Q13541 118 aaPredicted RBP6.75□□□□□ -1.33
UBR1-204ENST00000563239 TCTEX1D4Q5JR98 221 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 C9orf152Q5JTZ5 239 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 PRR31Q5SQ13 230 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 LYSMD2Q8IV50 215 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 NPBQ8NG41 125 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 OR8H1Q8NGG4 311 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 SGMS2Q8NHU3 365 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 GPX8Q8TED1 209 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 HSPB9Q9BQS6 159 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 RBM38Q9H0Z9 239 aaKnown RBP6.75□□□□□ -1.33
UBR1-204ENST00000563239 LIN7CQ9NUP9 197 aaKnown RBP6.75□□□□□ -1.33
UBR1-204ENST00000563239 ZNF107Q9UII5 783 aaPredicted RBP6.75□□□□□ -1.33
UBR1-204ENST00000563239 SCOCQ9UIL1 159 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 ZNF221Q9UK13 617 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 OR2W1Q9Y3N9 320 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 TGP01266 2768 aa6.75□□□□□ -1.33
UBR1-204ENST00000563239 NBEAL2Q6ZNJ1 2754 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 OR5H14A6NHG9 310 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 J3QRK9 145 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 M0R1X1 148 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 NDUFA3O95167 84 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 MC5RP33032 325 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 PRSS3P35030 304 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 CBX5P45973 191 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 ZNF660Q6AZW8 331 aaPredicted RBP6.74□□□□□ -1.33
UBR1-204ENST00000563239 MZT2AQ6P582 158 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 OR5AU1Q8NGC0 362 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 OR5AP2Q8NGF4 316 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 DDB2Q92466 427 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 AP3S1Q92572 193 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 NOL4LQ96MY1 436 aaPredicted RBP6.74□□□□□ -1.33
UBR1-204ENST00000563239 ABHD1Q96SE0 405 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 SLIRPQ9GZT3 109 aaKnown RBP6.74□□□□□ -1.33
UBR1-204ENST00000563239 CCDC59Q9P031 241 aaKnown RBP6.74□□□□□ -1.33
UBR1-204ENST00000563239 LINC00527Q9UJ94 153 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 MRPS7Q9Y2R9 242 aaKnown RBP6.74□□□□□ -1.33
UBR1-204ENST00000563239 WASHC3Q9Y3C0 194 aa6.74□□□□□ -1.33
UBR1-204ENST00000563239 LINC00473A8K010 186 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 FCN1O00602 326 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 NBR2O15453 112 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 FBXO24O75426 580 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 TSPAN15O95858 294 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 IGLV2-23P01705 113 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 OR5H8P0DN80 308 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 AADACP22760 399 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 FCGR2CP31995 323 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 DUTP33316 252 aaKnown RBP6.73□□□□□ -1.33
UBR1-204ENST00000563239 LUMP51884 338 aaPredicted RBP6.73□□□□□ -1.33
UBR1-204ENST00000563239 BRWD1-AS2P59051 145 aa6.73□□□□□ -1.33
UBR1-204ENST00000563239 RPL30P62888 115 aaKnown RBP6.73□□□□□ -1.33
UBR1-204ENST00000563239 CD83Q01151 205 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms