RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 Q8N6K4 173 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 ZNF383Q8NA42 475 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 FAM216AQ8WUB2 273 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 CAPSLQ8WWF8 208 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 EDARADDQ8WWZ3 215 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 TRIM63Q969Q1 353 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 JMJD8Q96S16 334 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 C19orf24Q9BVV8 132 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 FXYD6Q9H0Q3 95 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 DPAGT1Q9H3H5 408 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 CCL28Q9NRJ3 127 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 EHFQ9NZC4 300 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 C1RLQ9NZP8 487 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 OR2W1Q9Y3N9 320 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 LINC00473A8K010 186 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 TRIM77I1YAP6 450 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 RAB29O14966 203 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 CTDSPLO15194 276 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 TPPPO94811 219 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 PPYP01298 95 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 CD3DP04234 171 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 CTXN2P0C2S0 81 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 ZNF735P0CB33 412 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 IL3RAP26951 378 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 GPR12P47775 334 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 FXYD4P59646 89 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 RPL30P62888 115 aaKnown RBP7.81□□□□□ -1.16
CLK3-208ENST00000562626 DYRK1AQ13627 763 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 Q6ZSV7 163 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 MFSD4AQ8N468 514 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 OR5H2Q8NGV7 314 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 OR5R1Q8NH85 324 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 FCAMRQ8WWV6 532 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 MRGPRFQ96AM1 343 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 EAF1Q96JC9 268 aaPredicted RBP7.81□□□□□ -1.16
CLK3-208ENST00000562626 SRRQ9GZT4 340 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 ABCB10Q9NRK6 738 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 NECAP2Q9NVZ3 263 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 PIPOXQ9P0Z9 390 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 SIGLEC9Q9Y336 463 aa7.81□□□□□ -1.16
CLK3-208ENST00000562626 OR5H14A6NHG9 310 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 H0YJW9 148 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 M0R1X1 148 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 GSTZ1O43708 216 aaPredicted RBP7.8□□□□□ -1.16
CLK3-208ENST00000562626 RBBP9O75884 186 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 CD74P04233 296 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 BRS3P32247 399 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 S100A5P33763 92 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 ETV6P41212 452 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 LUMP51884 338 aaPredicted RBP7.8□□□□□ -1.16
CLK3-208ENST00000562626 F2RL1P55085 397 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 BRWD1-AS2P59051 145 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 TAS2R46P59540 309 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 BLCAPP62952 87 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 EBI3Q14213 229 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 TMEM95Q3KNT9 176 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 AADACL3Q5VUY0 350 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 CCDC144NLQ6NUI1 221 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 FAM71F2Q6NXP2 309 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 SECTM1Q8WVN6 248 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 GIMAP1Q8WWP7 306 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 DDB2Q92466 427 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 ZNF2Q9BSG1 426 aaPredicted RBP7.8□□□□□ -1.16
CLK3-208ENST00000562626 SLC25A33Q9BSK2 321 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 AKIP1Q9NQ31 210 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 PLSCR3Q9NRY6 295 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 ZNF221Q9UK13 617 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 GAB2Q9UQC2 676 aa7.8□□□□□ -1.16
CLK3-208ENST00000562626 BTBD17A6NE02 478 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 RNF212BA8MTL3 300 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 TNFSF12O43508 249 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 IGKV1-16P04430 117 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 HKR1P10072 659 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 TMEM11P17152 192 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 MDKP21741 143 aaPredicted RBP7.79□□□□□ -1.16
CLK3-208ENST00000562626 CD1BP29016 333 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 DUTP33316 252 aaKnown RBP7.79□□□□□ -1.16
CLK3-208ENST00000562626 HES1Q14469 280 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 BAK1Q16611 211 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 PYDC2Q56P42 97 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 VAX1Q5SQQ9 334 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 HIST2H2BDQ6DRA6 164 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 DHRS7BQ6IAN0 325 aaPredicted RBP7.79□□□□□ -1.16
CLK3-208ENST00000562626 DHRS11Q6UWP2 260 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 ZNF818PQ6ZRF7 136 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 LHFPL1Q86WI0 220 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 TMEM17Q86X19 198 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 THNSL2Q86YJ6 484 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 ZNF645Q8N7E2 425 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 TMEM229BQ8NBD8 167 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 OR4C16Q8NGL9 310 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 ZFAND2BQ8WV99 257 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 MOB3AQ96BX8 217 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 RBM14Q96PK6 669 aaKnown RBP7.79□□□□□ -1.16
CLK3-208ENST00000562626 S1PR3Q99500 378 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 SLC5A7Q9GZV3 580 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 ZNF702PQ9H963 129 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 BATF3Q9NR55 127 aa7.79□□□□□ -1.16
CLK3-208ENST00000562626 ANKRD20A5PA0PJZ0 165 aa7.78□□□□□ -1.16
CLK3-208ENST00000562626 TMEM89A2RUT3 159 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms