RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 ARPC1AQ92747 370 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 CLCC1Q96S66 551 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 GFI1Q99684 422 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 AGMATQ9BSE5 352 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 PLEKHJ1Q9NW61 149 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 AK3Q9UIJ7 227 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 LSM2Q9Y333 95 aaKnown RBP8.98□□□□□ -0.97
USP3-220ENST00000561381 NUBP2Q9Y5Y2 271 aa8.98□□□□□ -0.97
USP3-220ENST00000561381 OR5H14A6NHG9 310 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 PTGES3LE9PB15 166 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 LINC01619G3V211 115 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 H7C2Y5 167 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 PROP1O75360 226 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
USP3-220ENST00000561381 LGALS1P09382 135 aaKnown RBP8.97□□□□□ -0.97
USP3-220ENST00000561381 SCTP09683 121 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 CD37P11049 281 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 P2RY14Q15391 338 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 HSD17B12Q53GQ0 312 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 MS4A15Q8N5U1 240 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 OR5AN1Q8NGI8 311 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 PHYHIPQ92561 330 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 TMEM203Q969S6 136 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 MS4A10Q96PG2 267 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 MND1Q9BWT6 205 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 C11orf54Q9H0W9 315 aaPredicted RBP8.97□□□□□ -0.97
USP3-220ENST00000561381 LPAR5Q9H1C0 372 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 RNF150Q9ULK6 438 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 WASHC3Q9Y3C0 194 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 STAB2Q8WWQ8 2551 aa8.97□□□□□ -0.97
USP3-220ENST00000561381 ELOA3CA0A087WX78 387 aaPredicted RBP8.96□□□□□ -0.98
USP3-220ENST00000561381 TRBV6-6A0A0A6YYG2 114 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 TRIM64CA6NLI5 447 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 BPNT1O95861 308 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 IGKV1-16P04430 117 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 UCHL1P09936 223 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 GP9P14770 177 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 CEACAM6P40199 344 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 HLA-DRB3P79483 266 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 PSG5Q15238 335 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 SPHARQ15513 63 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 ACTBL2Q562R1 376 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 RNLSQ5VYX0 342 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 ACSM6Q6P461 480 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 CD200R1LQ6Q8B3 271 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 UNQ5815/PRO19632Q6UWF5 114 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 MOB1BQ7L9L4 216 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 HAPLN4Q86UW8 402 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 PPP1R27Q86WC6 154 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 LFNGQ8NES3 379 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 RCHY1Q96PM5 261 aa8.96□□□□□ -0.98
USP3-220ENST00000561381 METTL1Q9UBP6 276 aaKnown RBP8.96□□□□□ -0.98
USP3-220ENST00000561381 IGKV1-6A0A0C4DH72 117 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 FOXI3A8MTJ6 420 aaPredicted RBP8.95□□□□□ -0.98
USP3-220ENST00000561381 C3orf84H3BNL1 204 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 ITGB1BP1O14713 200 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 CASQ2O14958 399 aaPredicted RBP8.95□□□□□ -0.98
USP3-220ENST00000561381 CA2P00918 260 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 FRMD6-AS1P0C7T7 363 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 MC5RP33032 325 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 TMEM50BP56557 158 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 TPPP2P59282 170 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 TMEM267Q0VDI3 215 aaPredicted RBP8.95□□□□□ -0.98
USP3-220ENST00000561381 MED22Q15528 200 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 LIPKQ5VXJ0 399 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 ZNF562Q6V9R5 426 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 TMEM91Q6ZNR0 172 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 FAM89BQ8N5H3 189 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 TCTEX1D1Q8N7M0 179 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 ZNF383Q8NA42 475 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 OR6M1Q8NGM8 313 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 Q9N2K0 584 aa8.95□□□□□ -0.98
USP3-220ENST00000561381 AK6Q9Y3D8 172 aaKnown RBP8.95□□□□□ -0.98
USP3-220ENST00000561381 ARPC1BO15143 372 aaKnown RBP8.94□□□□□ -0.98
USP3-220ENST00000561381 HSPA12AO43301 675 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 RBBP9O75884 186 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 HSPB1P04792 205 aaKnown RBP8.94□□□□□ -0.98
USP3-220ENST00000561381 CD3GP09693 182 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 ARSBP15848 533 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 CPEP16870 476 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 ZBTB25P24278 435 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 CLDN12P56749 244 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 RPS16P62249 146 aaKnown RBP8.94□□□□□ -0.98
USP3-220ENST00000561381 RPS25P62851 125 aaKnown RBP8.94□□□□□ -0.98
USP3-220ENST00000561381 PLA2G7Q13093 441 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 IRF3Q14653 427 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 AKIRIN2Q53H80 203 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 PLAC9Q5JTB6 97 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 GRPEL2Q8TAA5 225 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 MUC7Q8TAX7 377 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 PTX4Q96A99 478 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 ARHGAP5-AS1Q96IT6 56 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 RHOVQ96L33 236 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 RNF5Q99942 180 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 URM1Q9BTM9 101 aaKnown RBP8.94□□□□□ -0.98
USP3-220ENST00000561381 RIMS4Q9H426 269 aaPredicted RBP8.94□□□□□ -0.98
USP3-220ENST00000561381 PLGRKTQ9HBL7 147 aa8.94□□□□□ -0.98
USP3-220ENST00000561381 ANKRD65E5RJM6 399 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 SLC17A2O00624 439 aa8.93□□□□□ -0.98
USP3-220ENST00000561381 SLC25A17O43808 307 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms