RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 A0A1W2PQD3 144 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 F5H5K5 113 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 SLC35E2BP0CK96 405 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 ADORA1P30542 326 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 AGTR1P30556 359 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 TMEM258P61165 79 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 GLO1Q04760 184 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 SCGB1D4Q6XE38 83 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 OR2D3Q8NGH3 330 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 NKX6-2Q9C056 277 aaPredicted RBP1.09□□□□□ -2.23
USP8-218ENST00000561330 HHLA3Q9XRX5 114 aa1.09□□□□□ -2.23
USP8-218ENST00000561330 NYNRINQ9P2P1 1898 aaKnown RBP1.08□□□□□ -2.24
USP8-218ENST00000561330 ARL6IP5O75915 188 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 ASS1P00966 412 aaKnown RBP1.08□□□□□ -2.24
USP8-218ENST00000561330 CD24P25063 80 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 G6PCP35575 357 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 DAPP51397 102 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 ZNF791Q3KP31 576 aaPredicted RBP1.08□□□□□ -2.24
USP8-218ENST00000561330 DRAM2Q6UX65 266 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 CYTH2Q99418 400 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 EIF5A2Q9GZV4 153 aaKnown RBP1.08□□□□□ -2.24
USP8-218ENST00000561330 C8orf4Q9NR00 106 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 MS4A12Q9NXJ0 267 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 STK38LQ9Y2H1 464 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 SOX21Q9Y651 276 aaPredicted RBP1.08□□□□□ -2.24
USP8-218ENST00000561330 MALRD1Q5VYJ5 2156 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 DISP1Q96F81 1524 aa1.08□□□□□ -2.24
USP8-218ENST00000561330 GSTZ1O43708 216 aaPredicted RBP1.07□□□□□ -2.24
USP8-218ENST00000561330 SYNGR1O43759 233 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 HBZP02008 142 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 C1QCP02747 245 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 CRYBA1P05813 215 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 S100A9P06702 114 aaKnown RBP1.07□□□□□ -2.24
USP8-218ENST00000561330 BPGMP07738 259 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 STC1P52823 247 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 DLX6P56179 175 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 CTBP2P56545 445 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 TAS2R30P59541 319 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 DAD1P61803 113 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 CLDND2Q8NHS1 167 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 DYNC2LI1Q8TCX1 351 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 ASB17Q8WXJ9 295 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 GNB1LQ9BYB4 327 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 OR51B6Q9H340 312 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 SLC2A9Q9NRM0 540 aa1.07□□□□□ -2.24
USP8-218ENST00000561330 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.07□□□□□ -2.24
USP8-218ENST00000561330 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 IGKV2-40A0A087WW87 121 aaPredicted RBP1.06□□□□□ -2.24
USP8-218ENST00000561330 LOC100506127A0A0U1RQW1 187 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 MPZL2O60487 215 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 NDUFB2O95178 105 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 IGKV2D-40P01614 121 aaPredicted RBP1.06□□□□□ -2.24
USP8-218ENST00000561330 GP1BAP07359 652 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 CA7P43166 264 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 Q3ZCU0 254 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 RBM48Q5RL73 367 aaKnown RBP1.06□□□□□ -2.24
USP8-218ENST00000561330 SMIM12Q96EX1 92 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 OR7D2Q96RA2 312 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 NRBP2Q9NSY0 501 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 MAP3K19Q56UN5 1328 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 DSCAML1Q8TD84 2053 aa1.06□□□□□ -2.24
USP8-218ENST00000561330 GOLGA8QA0A0J9YX86 632 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 BHLHE40O14503 412 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 COPEO14579 308 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 OR10J1P30954 320 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 CRATP43155 626 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 HERVK_113P63121 156 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 SYCP1Q15431 976 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 MESTQ5EB52 335 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 SPATA31B1PQ5VZV4 182 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 TMEM42Q69YG0 159 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 OR10K2Q6IF99 312 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 ATP5L2Q7Z4Y8 100 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 RPS4Y2Q8TD47 263 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 RNASEH2CQ8TDP1 164 aaKnown RBP1.05□□□□□ -2.24
USP8-218ENST00000561330 TMEM208Q9BTX3 173 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 AGPAT3Q9NRZ7 376 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 ANGPT4Q9Y264 503 aa1.05□□□□□ -2.24
USP8-218ENST00000561330 IGHV3-64A0A075B6Q5 118 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 IGKV3D-7A0A0C4DH55 119 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 IGKV3OR2-268A0A0C4DH90 116 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 MRASO14807 208 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 PGLYRP1O75594 196 aaPredicted RBP1.04□□□□□ -2.24
USP8-218ENST00000561330 PVALBP20472 110 aaPredicted RBP1.04□□□□□ -2.24
USP8-218ENST00000561330 CFL1P23528 166 aaKnown RBP1.04□□□□□ -2.24
USP8-218ENST00000561330 GNA12Q03113 381 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 SMCR5Q8TEV8 140 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 CYGBQ8WWM9 190 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 ASCL3Q9NQ33 180 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 NPATQ14207 1427 aa1.04□□□□□ -2.24
USP8-218ENST00000561330 SLX4Q8IY92 1834 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 MEIKINA0A087WXM9 373 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 TRBV6-5A0A0K0K1A5 114 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 F8W036 122 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 TXNDC9O14530 226 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 NPYP01303 97 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 SYT1P21579 422 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 BTN3A2P78410 334 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 NNATQ16517 81 aa1.03□□□□□ -2.24
USP8-218ENST00000561330 TMEM155Q4W5P6 130 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms