RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 KLHDC7BQ96G42 594 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 ALKBH7Q9BT30 221 aaPredicted RBP13.55□□□□□ -0.24
PBX1-219ENST00000560641 PATZ1Q9HBE1 687 aaKnown RBP13.55□□□□□ -0.24
PBX1-219ENST00000560641 TMEM38BQ9NVV0 291 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 GABRG2P18507 467 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 CD33P20138 364 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 BPIFB3P59826 476 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 RPP30P78346 268 aaKnown RBP13.55□□□□□ -0.24
PBX1-219ENST00000560641 ZNF114Q8NC26 417 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 KCNS1Q96KK3 526 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 METTL7AQ9H8H3 244 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 PLA2G3Q9NZ20 509 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 RNF114Q9Y508 228 aa13.55□□□□□ -0.24
PBX1-219ENST00000560641 TRBV20OR9-2A0A075B6H5 130 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 OR10J4P0C629 311 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 RHOGP84095 191 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 CCDC74BQ96LY2 380 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 LRFN3Q9BTN0 628 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 NPIPA3F8WFD2 350 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 ZNF468Q5VIY5 522 aaPredicted RBP13.54□□□□□ -0.24
PBX1-219ENST00000560641 TIPARPQ7Z3E1 657 aaKnown RBP13.54□□□□□ -0.24
PBX1-219ENST00000560641 KMT5CQ86Y97 462 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 GCNT2Q8N0V5 402 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 OR10G3Q8NGC4 313 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 C11orf52Q96A22 123 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 TRAV30A0A087WSZ9 112 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 NXPH2O95156 264 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 HNRNPA3P51991 378 aaKnown RBP13.54□□□□□ -0.24
PBX1-219ENST00000560641 PRRX1P54821 245 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 ALKBH2Q6NS38 261 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 C19orf35Q6ZS72 473 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 MOB1BQ7L9L4 216 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 TCTEX1D1Q8N7M0 179 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 OR51H1Q8NH63 302 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 OR6C1Q96RD1 312 aa13.54□□□□□ -0.24
PBX1-219ENST00000560641 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
PBX1-219ENST00000560641 NDUFB4O95168 129 aa13.53□□□□□ -0.24
PBX1-219ENST00000560641 IZUMO4Q1ZYL8 232 aa13.53□□□□□ -0.24
PBX1-219ENST00000560641 LRP11Q86VZ4 500 aa13.53□□□□□ -0.24
PBX1-219ENST00000560641 SLC24A4Q8NFF2 622 aa13.53□□□□□ -0.24
PBX1-219ENST00000560641 QTRT1Q9BXR0 403 aaKnown RBP13.53□□□□□ -0.24
PBX1-219ENST00000560641 RNF208Q9H0X6 261 aa13.53□□□□□ -0.24
PBX1-219ENST00000560641 RNF212BA8MTL3 300 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 CBLN1P23435 193 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 PSG4Q00888 419 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 WDR73Q6P4I2 378 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 PSMF1Q92530 271 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 ZNF501Q96CX3 271 aaPredicted RBP13.52□□□□□ -0.24
PBX1-219ENST00000560641 STARD4Q96DR4 205 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 SAMD10Q9BYL1 202 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 MTIF3Q9H2K0 278 aaKnown RBP13.52□□□□□ -0.24
PBX1-219ENST00000560641 NRN1Q9NPD7 142 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 ERRFI1Q9UJM3 462 aaPredicted RBP13.52□□□□□ -0.24
PBX1-219ENST00000560641 IGHV3-20A0A0C4DH32 117 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 TSPOP30536 169 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 PCBD1P61457 104 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 RHOBP62745 196 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 NRN1LQ496H8 165 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 BAGE3Q86Y29 109 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 BAGE2Q86Y30 109 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 MKXQ8IYA7 352 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 PIGCQ92535 297 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 FGF23Q9GZV9 251 aaPredicted RBP13.52□□□□□ -0.24
PBX1-219ENST00000560641 SLC35D1Q9NTN3 355 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 BET1LQ9NYM9 111 aa13.52□□□□□ -0.24
PBX1-219ENST00000560641 A0A1W2PPC4 97 aa13.52□□□□□ -0.25
PBX1-219ENST00000560641 ATP5G3P48201 142 aa13.52□□□□□ -0.25
PBX1-219ENST00000560641 C20orf204Q6ZNR8 217 aa13.52□□□□□ -0.25
PBX1-219ENST00000560641 RPP25Q9BUL9 199 aaKnown RBP13.52□□□□□ -0.25
PBX1-219ENST00000560641 TBL2Q9Y4P3 447 aaKnown RBP13.52□□□□□ -0.25
PBX1-219ENST00000560641 PMCHL1Q16048 86 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 CEACAM21Q3KPI0 293 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 Q6ZN92 141 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 ZDHHC23Q8IYP9 409 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 ZNF709Q8N972 641 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 ZBTB34Q8NCN2 500 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 OR10P1Q8NGE3 313 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 OR4P4Q8NGL7 312 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 OR1L1Q8NH94 360 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 SPACA9Q96E40 222 aaPredicted RBP13.51□□□□□ -0.25
PBX1-219ENST00000560641 ZNF837Q96EG3 531 aaPredicted RBP13.51□□□□□ -0.25
PBX1-219ENST00000560641 ARL2-SNX15V9GYD0 113 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 TDRD6O60522 2096 aaKnown RBP13.51□□□□□ -0.25
PBX1-219ENST00000560641 MPDU1O75352 247 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 ZFAND5O76080 213 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 ZNF32P17041 273 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 SRD5A2P31213 254 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 CEACAM8P31997 349 aaPredicted RBP13.51□□□□□ -0.25
PBX1-219ENST00000560641 TFF3Q07654 80 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 DNAH14Q0VDD8 3507 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 EIF4EBP1Q13541 118 aaPredicted RBP13.51□□□□□ -0.25
PBX1-219ENST00000560641 SMIM15Q7Z3B0 74 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 FGFRL1Q8N441 504 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 OR1L6Q8NGR2 347 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 APOBEC3DQ96AK3 386 aaPredicted RBP13.51□□□□□ -0.25
PBX1-219ENST00000560641 DERL1Q9BUN8 251 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 GNB4Q9HAV0 340 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 WDR83OSQ9Y284 106 aa13.51□□□□□ -0.25
PBX1-219ENST00000560641 CHCHD2Q9Y6H1 151 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms