RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 NINJ1Q92982 152 aa13.13□□□□□ -0.31
CDC42BPB-204ENST00000559043 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
CDC42BPB-204ENST00000559043 WFDC1Q9HC57 220 aa13.13□□□□□ -0.31
CDC42BPB-204ENST00000559043 PARP11Q9NR21 331 aa13.13□□□□□ -0.31
CDC42BPB-204ENST00000559043 WIPI2Q9Y4P8 454 aa13.13□□□□□ -0.31
CDC42BPB-204ENST00000559043 IGKV1D-17A0A075B6S4 117 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 LRRC30A6NM36 301 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 SIGLEC5O15389 551 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 MED6O75586 246 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 ATG12O94817 140 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 IGHV2-70P01814 119 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 IRF2P14316 349 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 VDAC1P21796 283 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 F2RP25116 425 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 NKX2-1P43699 371 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 ZNF273Q14593 569 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 GPHA2Q96T91 129 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 GINS3Q9BRX5 216 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 MBNL3Q9NUK0 354 aaKnown RBP13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 PPIAL4EA0A075B759 164 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 BORCS7-ASMTA0A0B4J1R7 106 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 PPIAL4DF5H284 164 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 SIRPB1O00241 398 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 SH2D1BO14796 132 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 PPIHO43447 177 aaKnown RBP13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 FBXO24O75426 580 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 SEC11BP0C7V7 166 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 PPIAL4FP0DN26 164 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 PSG2P11465 335 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 S100GP29377 79 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 SRSF3P84103 164 aaKnown RBP13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 DEFA5Q01523 94 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 DUX4L9Q6RFH8 374 aaPredicted RBP13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 LYPD2Q6UXB3 125 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 CLEC9AQ6UXN8 241 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 LYPD6BQ8NI32 183 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 HRH4Q9H3N8 390 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 PPIAL4AQ9Y536 164 aa13.12□□□□□ -0.31
CDC42BPB-204ENST00000559043 MED13LQ71F56 2210 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 AKAP9Q99996 3911 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 IGHV4-30-2A0A087WSY4 118 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 OOEPA6NGQ2 149 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 CYSRT1A8MQ03 144 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 ADAM20O43506 726 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 FCN3O75636 299 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 GYPAP02724 150 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 ADCYAP1P18509 176 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 CAV2P51636 162 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 C1orf87Q8N0U7 546 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 LRRC75A-AS1Q8N1F1 130 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 OR10V1Q8NGI7 309 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 C10orf105Q8TEF2 133 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 OR1A1Q9P1Q5 309 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 SPP1P10451 314 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 LMO1P25800 156 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 AKR1C2P52895 323 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 EWSR1Q01844 656 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 ID3Q02535 119 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 NHLH2Q02577 135 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 AKR1C1Q04828 323 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 OR2C3Q8N628 320 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 BPESC1Q9GZL8 116 aa13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 FAM212BQ9NTI7 297 aaPredicted RBP13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 CARHSP1Q9Y2V2 147 aaKnown RBP13.11□□□□□ -0.31
CDC42BPB-204ENST00000559043 VWC2LB2RUY7 222 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 TNFSF12O43508 249 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 IGLV2-14P01704 120 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 MMP9P14780 707 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 PDLIM4P50479 330 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 F2RL1P55085 397 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 POLR2GP62487 172 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 HMGN3Q15651 99 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 STUMQ69YW2 141 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 FAM168AQ92567 244 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 AKR1E2Q96JD6 320 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 NKX6-2Q9C056 277 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 OR14J1Q9UGF5 321 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 TRAPPC2LQ9UL33 140 aa13.1□□□□□ -0.31
CDC42BPB-204ENST00000559043 DNASE2O00115 360 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 HAND1O96004 215 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 SELLP14151 372 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 MUC1P15941 1255 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 GPR6P46095 362 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 CLEC12BQ2HXU8 276 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 SMIM21Q3B7S5 101 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 CXorf66Q5JRM2 361 aaPredicted RBP13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 FIP1L1Q6UN15 594 aaKnown RBP13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 SPAG16Q8N0X2 631 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 FGFRL1Q8N441 504 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
CDC42BPB-204ENST00000559043 CCL13Q99616 98 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms