RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SECTM1Q8WVN6 248 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 NABP1Q96AH0 204 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 APOBEC3DQ96AK3 386 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-207ENST00000558335 IMMP1LQ96LU5 166 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 MS4A10Q96PG2 267 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TBX15Q96SF7 602 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 NKX3-1Q99801 234 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-207ENST00000558335 FOXB1Q99853 325 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 PYGO2Q9BRQ0 406 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 NIPSNAP3BQ9BS92 247 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 C1QTNF5Q9BXJ0 243 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF576Q9H609 170 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 AKIRIN1Q9H9L7 192 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TMEM9BQ9NQ34 198 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 AK3Q9UIJ7 227 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 JPT1Q9UK76 154 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 MPC1Q9Y5U8 109 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 KIAA1549Q9HCM3 1950 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SPTBP11277 2137 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TNRC6BQ9UPQ9 1833 aaKnown RBP4.72□□□□□ -1.65
GABPB1-207ENST00000558335 IGKV3D-15A0A087WSY6 115 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 TRAV38-1A0A0B4J264 116 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 IGHV3-20A0A0C4DH32 117 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 LOC101059948A0A1B0GTJ6 334 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 RBFOX3A6NFN3 312 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 MSGN1A6NI15 193 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 SHISA7A6NL88 538 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 NPIPB11E5RHQ5 1161 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 G3V3Y1 287 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 PHF1O43189 567 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 GFRA3O60609 400 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 PPYP01298 95 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 HBZP02008 142 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 REG1AP05451 166 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 AADACP22760 399 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 S100A7P31151 101 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 HNRNPA3P51991 378 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 TPPP2P59282 170 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 PLP1P60201 277 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 FGF12P61328 243 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 RPL24P83731 157 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 RNPS1Q15287 305 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 BATFQ16520 125 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 CD300EQ496F6 205 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 C4orf17Q53FE4 359 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 GCSAMLQ5JQS6 135 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 RNFT1Q5M7Z0 435 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 GFI1BQ5VTD9 330 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 MRPL54Q6P161 138 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 WDR82Q6UXN9 313 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 FAM219AQ8IW50 185 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 C1orf174Q8IYL3 243 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 ZDHHC23Q8IYP9 409 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 TDHQ8IZJ6 230 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 FBXL14Q8N1E6 418 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 CISD2Q8N5K1 135 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 IL22RA1Q8N6P7 574 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 FER1L6-AS1Q8NA97 138 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 ZNF784Q8NCA9 323 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 OR2I1PQ8NGU4 316 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 OR10X1Q8NGY0 326 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 OR2G3Q8NGZ4 309 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 OR52E5Q8NH55 327 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 Q8WTZ3 238 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 TMEM170AQ8WVE7 144 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 LSM10Q969L4 123 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 MRPL24Q96A35 216 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 DNAJA3Q96EY1 480 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 THOC3Q96J01 351 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 LOXL4Q96JB6 756 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 LYZL4Q96KX0 146 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 SPACA5Q96QH8 159 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 STRADBQ9C0K7 418 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 OR2H1Q9GZK4 316 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 GEMIN7Q9H840 131 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 PATZ1Q9HBE1 687 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 GP6Q9HCN6 339 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 SH2D2AQ9NP31 389 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 LIN7CQ9NUP9 197 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 OR6C3Q9NZP0 311 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 MCTS1Q9ULC4 181 aaKnown RBP4.71□□□□□ -1.66
GABPB1-207ENST00000558335 LAMP3Q9UQV4 416 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 ATP23Q9Y6H3 246 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 WSB1Q9Y6I7 421 aa4.71□□□□□ -1.66
GABPB1-207ENST00000558335 PHF3Q92576 2039 aaKnown RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 RP1P56715 2156 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 PPIAL4EA0A075B759 164 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 PPIAL4CA0A0B4J2A2 164 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 hCG_38984A0A1B0GV85 526 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 TMEM189A5PLL7 270 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 MAP1LC3B2A6NCE7 125 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ANKRD30BLA7E2S9 258 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 PPIAL4DF5H284 164 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 K7EQM0 130 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 K7N7A8 449 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 M0QZ24 198 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 ZIC3O60481 467 aa4.7□□□□□ -1.66
GABPB1-207ENST00000558335 MRPL33O75394 65 aaKnown RBP4.7□□□□□ -1.66
GABPB1-207ENST00000558335 OR7C1O76099 320 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms