RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 LGALS7P47929 136 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 RPS16P62249 146 aaKnown RBP3.9□□□□□ -1.79
SPG11-208ENST00000558155 ADARB1P78563 741 aaKnown RBP3.9□□□□□ -1.79
SPG11-208ENST00000558155 HTD2P86397 168 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 TNFRSF9Q07011 255 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 PSG5Q15238 335 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 DEFB114Q30KQ6 69 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 ANKRD55Q3KP44 614 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 LPCAT4Q643R3 524 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 FAM71F2Q6NXP2 309 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 ZNF343Q6P1L6 599 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 ZNF554Q86TJ5 538 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 WFDC3Q8IUB2 231 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 BVESQ8NE79 360 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 OR2AK2Q8NG84 335 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 OR52L2PQ8NGH6 319 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 OR51A2Q8NGJ7 313 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 OR8J1Q8NGP2 316 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 OR5AK2Q8NH90 309 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 TSEN15Q8WW01 171 aaKnown RBP3.9□□□□□ -1.79
SPG11-208ENST00000558155 GHSRQ92847 366 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 TRIM63Q969Q1 353 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 GALMQ96C23 342 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 NSL1Q96IY1 281 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 TSNAXQ99598 290 aaKnown RBP3.9□□□□□ -1.79
SPG11-208ENST00000558155 GGTLC1Q9BX51 225 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 TAF9BQ9HBM6 251 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 PPP1R14DQ9NXH3 145 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 TECRQ9NZ01 308 aaKnown RBP3.9□□□□□ -1.79
SPG11-208ENST00000558155 ZNF581Q9P0T4 197 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 METTL1Q9UBP6 276 aaKnown RBP3.9□□□□□ -1.79
SPG11-208ENST00000558155 JPT1Q9UK76 154 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 GAB2Q9UQC2 676 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 WASHC3Q9Y3C0 194 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 GMPPBQ9Y5P6 360 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 PEX16Q9Y5Y5 336 aa3.9□□□□□ -1.79
SPG11-208ENST00000558155 SAA2-SAA4A0A096LPE2 208 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 SNTNA6NMZ2 147 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 G3V2T6 193 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 H0YJW9 148 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 UBE2CO00762 179 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 SPRY2O43597 315 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 GPX5O75715 221 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 SCGB1D2O95969 90 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 CA2P00918 260 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 MAS1P04201 325 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 IFNA4P05014 189 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 GLAP06280 429 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 CD2P06729 351 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 SAA2P0DJI9 122 aaPredicted RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 CPEP16870 476 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 ZNF93P35789 620 aaPredicted RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 PPP1CCP36873 323 aaKnown RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 ALDH3A2P51648 485 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 PPP3R1P63098 170 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 MRPS15P82914 257 aaKnown RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 DYRK1AQ13627 763 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 SLC22A6Q4U2R8 563 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 ANKRD39Q53RE8 183 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 RAB12Q6IQ22 244 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 ZNF529Q6P280 563 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 FAM131AQ6UXB0 335 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 Q6ZWC4 215 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 LYG2Q86SG7 212 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 SPATA24Q86W54 205 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 GAPTQ8N292 157 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 ACBD7Q8N6N7 88 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 OR5AN1Q8NGI8 311 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 GRPEL2Q8TAA5 225 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 PHLDA1Q8WV24 401 aaPredicted RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 TRUB1Q8WWH5 349 aaKnown RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 THRSPQ92748 146 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 CCDC124Q96CT7 223 aaKnown RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 C4orf36Q96KX1 117 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 CENPOQ9BU64 300 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 TINAGL1Q9GZM7 467 aaPredicted RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 TMEM138Q9NPI0 162 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 MBNL3Q9NUK0 354 aaKnown RBP3.89□□□□□ -1.79
SPG11-208ENST00000558155 ABRACLQ9P1F3 81 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 STEAP1Q9UHE8 339 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 PFDN2Q9UHV9 154 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 ADAM30Q9UKF2 790 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 TP53TG1Q9Y2A0 90 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 ARL2BPQ9Y2Y0 163 aa3.89□□□□□ -1.79
SPG11-208ENST00000558155 UBE2QL1A1L167 161 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 FAM90A7PA6NKC0 464 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 FAM90A23PA8MXZ1 464 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 J3QRE1 110 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 EBAG9O00559 213 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 SPDEFO95238 335 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 TRBV12-3P01733 135 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 FOLR2P14207 255 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 FUT3P21217 361 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 CALB2P22676 271 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 BDKRB2P30411 391 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 CAPGP40121 348 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 MAP2K4P45985 399 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 SOX2P48431 317 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 ETV1P50549 477 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms