RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CD3EP07766 207 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 WDR38Q5JTN6 314 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 FAM159AQ6UWV7 190 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 GLIPR1P48060 266 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 MAVSQ7Z434 540 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 KCNS1Q96KK3 526 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 ZBP1Q9H171 429 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 GCM2O75603 506 aaPredicted RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 VAX1Q5SQQ9 334 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 TMEM170BQ5T4T1 132 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 CCL17Q92583 94 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 ABHD14AQ9BUJ0 271 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PXMP4Q9Y6I8 212 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 NAPSAO96009 420 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 WSB2Q9NYS7 404 aaPredicted RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 A8MWV9 139 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PSG2P11465 335 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 MBD1Q9UIS9 605 aaPredicted RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 TCRBV5S2A0A599 114 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF56Q15929 161 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PTGER1P34995 402 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 TIMM23BQ5SRD1 257 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 MMD2Q8IY49 270 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PRR14Q9BWN1 585 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 NXT2Q9NPJ8 142 aaKnown RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 ACSF3Q4G176 576 aaPredicted RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 GGACTQ9BVM4 153 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF430Q9H8G1 570 aaPredicted RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 PAX1P15863 534 aa7.74□□□□□ -1.17
SYNE3-205ENST00000557275 MARS2Q96GW9 593 aaKnown RBP7.74□□□□□ -1.17
SYNE3-205ENST00000557275 TRGV8A0A0C4DH27 118 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF137PP52743 207 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 RPL8P62917 257 aaKnown RBP7.73□□□□□ -1.17
SYNE3-205ENST00000557275 OR51G1Q8NGK1 321 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A10PA6NDY2 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A18PA6NE21 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A16PA6NEW6 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A20PA6NIJ5 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A8PA6NJQ4 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A7PA6NKC0 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A22PA8MWA6 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A12PA8MX19 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A5PA8MXJ8 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A23PA8MXZ1 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A15PP0C7V4 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A13PP0C7W8 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A14PP0C7W9 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM90A24PP0C7X0 464 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 MALP21145 153 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 CXCL13O43927 109 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 GUCA2AQ02747 115 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF600Q6ZNG1 722 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 UBE2FQ969M7 185 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 ELSPBP1Q96BH3 223 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 COX11Q9Y6N1 276 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 PLXNB2O15031 1838 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF729A6NN14 1252 aaPredicted RBP7.73□□□□□ -1.17
SYNE3-205ENST00000557275 WNT5AP41221 380 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 TMEM50BP56557 158 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 DLL1O00548 723 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 SP9P0CG40 484 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 SPATA46Q5T0L3 261 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 TNFRSF18Q9Y5U5 241 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 A0A0A6YYD5 115 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 MORN3Q6PF18 240 aaPredicted RBP7.73□□□□□ -1.17
SYNE3-205ENST00000557275 LMO7DNF2Z398 122 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FGF17O60258 216 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 HOXD4P09016 255 aaPredicted RBP7.73□□□□□ -1.17
SYNE3-205ENST00000557275 RAE1P78406 368 aaKnown RBP7.73□□□□□ -1.17
SYNE3-205ENST00000557275 CX3CL1P78423 397 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 OR11G2Q8NGC1 345 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF257Q9Y2Q1 563 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 A0A1W2PNR3 127 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 CLLU1OSQ5K130 101 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 SLC23A3Q6PIS1 610 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 OR8B12Q8NGG6 310 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 ORAOV1Q8WV07 137 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 FAM78AQ5JUQ0 283 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 PGPEP1LA6NFU8 196 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 LOXL3P58215 753 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 MS4A3Q96HJ5 214 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 LTB4R2Q9NPC1 389 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 EML6Q6ZMW3 1958 aa7.73□□□□□ -1.17
SYNE3-205ENST00000557275 TMEM238C9JI98 176 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 RPS11P62280 158 aaKnown RBP eCLIP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 GGTLC2Q14390 218 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 MMDQ15546 238 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 TRAV21A0A0B4J279 112 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 SRIP30626 198 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 DEFB108AA8MXU0 73 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 PLAURQ03405 335 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF117Q03924 483 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 MRGPRFQ96AM1 343 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 TRBV20OR9-2A0A075B6H5 130 aa7.72□□□□□ -1.17
SYNE3-205ENST00000557275 PRKNO60260 465 aaPredicted RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 HOXB1P14653 301 aaPredicted RBP7.72□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF645Q8N7E2 425 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms