RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 APOBEC3DQ96AK3 386 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM45BQ96B21 275 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 MSI2Q96DH6 328 aaKnown RBP3.73□□□□□ -1.81
ATXN3-241ENST00000556374 MALSU1Q96EH3 234 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 TVP23CQ96ET8 276 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 RAB40CQ96S21 281 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 TP53RKQ96S44 253 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 PFDN5Q99471 154 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 SRXN1Q9BYN0 137 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 LINC00470Q9BZP3 86 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 PARP12Q9H0J9 701 aaKnown RBP3.73□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM222Q9H0R3 208 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 WNT5BQ9H1J7 359 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 SH3BGRL3Q9H299 93 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 NIT2Q9NQR4 276 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 LYRM2Q9NU23 88 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-241ENST00000556374 LIN7CQ9NUP9 197 aaKnown RBP3.73□□□□□ -1.81
ATXN3-241ENST00000556374 GAR1Q9NY12 217 aaKnown RBP3.73□□□□□ -1.81
ATXN3-241ENST00000556374 LRFN1Q9P244 771 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 KCNS2Q9ULS6 477 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 ADGRG4Q8IZF6 3080 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 KIF26BQ2KJY2 2108 aa3.73□□□□□ -1.81
ATXN3-241ENST00000556374 KIAA1549Q9HCM3 1950 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 IGKV1D-8A0A087WSZ0 117 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 A0A087WWC5 75 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 hCG_1809904A0A1W2PP81 198 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 A0A1W2PPE2 198 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 A0A1W2PR64 198 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 A0A1W2PRV1 198 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 MEX3AA1L020 520 aaKnown RBP3.72□□□□□ -1.81
ATXN3-241ENST00000556374 IGSF23A1L1A6 192 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 C5orf63A6NC05 138 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 NKX2-6A6NCS4 301 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 CXorf65A6NEN9 183 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 FAM24AA6NFZ4 105 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 C5orf52A6NGY3 159 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OR5B21A6NL26 309 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 CD300LBA8K4G0 201 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF724A8MTY0 619 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF732B4DXR9 585 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 H3BQ15 152 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 HSPB6O14558 160 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 TXNL1O43396 289 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 CYTIPO60759 359 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 SLC25A6P12236 298 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 KLK2P20151 261 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 AGAP20933 346 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 UCP1P25874 307 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 APLNRP35414 380 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ARR3P36575 388 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 HAAOP46952 286 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 CYB561P49447 251 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 DYNLT3P51808 116 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 SOX8P57073 446 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OR2B8PP59922 312 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 RPS18P62269 152 aaKnown RBP3.72□□□□□ -1.81
ATXN3-241ENST00000556374 POLR2GP62487 172 aaKnown RBP eCLIP3.72□□□□□ -1.81
ATXN3-241ENST00000556374 PSG4Q00888 419 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 PLGLB1Q02325 96 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF92Q03936 586 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 HAGHQ16775 308 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 CEACAM21Q3KPI0 293 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 KHDC3LQ587J8 217 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 DMRTC1Q5HYR2 192 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF506Q5JVG8 444 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 DCAF12Q5T6F0 453 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ADAM5Q6NVV9 412 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 SLC16A13Q7RTY0 426 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 SLC35E3Q7Z769 313 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF573Q86YE8 665 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 Q8IYB0 196 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 H1FOOQ8IZA3 346 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-241ENST00000556374 FAM24BQ8N5W8 94 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM252Q8N6L7 170 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OR56B2PQ8NGI1 322 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OR5C1Q8NGR4 320 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OR13D1Q8NGV5 346 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 LILRB1Q8NHL6 650 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-241ENST00000556374 SAP25Q8TEE9 199 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ISOC2Q96AB3 205 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 RITA1Q96K30 269 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 IMMP1LQ96LU5 166 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM56Q96MV1 263 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OR5B12Q96R08 314 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 MESP1Q9BRJ9 268 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 RTL8AQ9BWD3 113 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 C1QTNF5Q9BXJ0 243 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 STRADBQ9C0K7 418 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 EGLN1Q9GZT9 426 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OR51M1Q9H341 326 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 ESRP2Q9H6T0 727 aaKnown RBP3.72□□□□□ -1.81
ATXN3-241ENST00000556374 Q9N2K0 584 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 SLC7A10Q9NS82 523 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 OCIAD1Q9NX40 245 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 GNG13Q9P2W3 67 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 POLDIP2Q9Y2S7 368 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 MPC1Q9Y5U8 109 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 LIPGQ9Y5X9 500 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 HS3ST3B1Q9Y662 390 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 WSB1Q9Y6I7 421 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms