RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 SLC25A16P16260 332 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 NPPCP23582 126 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 BLVRBP30043 206 aaPredicted RBP1.21□□□□□ -2.22
SCFD1-217ENST00000555953 LPAR6P43657 344 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 RPL14P50914 215 aaKnown RBP1.21□□□□□ -2.22
SCFD1-217ENST00000555953 RWDD2BP57060 319 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 BTN3A2P78410 334 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 TMEM267Q0VDI3 215 aaPredicted RBP1.21□□□□□ -2.22
SCFD1-217ENST00000555953 FAM229BQ4G0N7 80 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 MESTQ5EB52 335 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 CCDC121Q6ZUS5 278 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 OR10D3Q8NH80 312 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 FNDC9Q8TBE3 224 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 DNAJB3Q8WWF6 145 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 ASB13Q8WXK3 278 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 TIPINQ9BVW5 301 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 OR51B6Q9H340 312 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 TMEM106BQ9NUM4 274 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 SNX12Q9UMY4 172 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 CCL26Q9Y258 94 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 BAHCC1Q9P281 2608 aa1.21□□□□□ -2.22
SCFD1-217ENST00000555953 NYNRINQ9P2P1 1898 aaKnown RBP1.2□□□□□ -2.22
SCFD1-217ENST00000555953 SORL1Q92673 2214 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 A0A0A6YYH2 397 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 TRAV8-1A0A0A6YYK1 113 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 TEX50A0A1B0GTY4 177 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 GRIFINA4D1Z8 144 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 A6NJ64 397 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 GOLGA8KD6RF30 607 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 GOLGA8MH3BSY2 632 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 AZIN1O14977 448 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 TRAPPC3O43617 180 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 ZNF189O75820 626 aaPredicted RBP1.2□□□□□ -2.22
SCFD1-217ENST00000555953 SOD1P00441 154 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 ESDP10768 282 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 CRHBPP24387 322 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 OR10J1P30954 320 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 PPP1CCP36873 323 aaKnown RBP1.2□□□□□ -2.22
SCFD1-217ENST00000555953 GABRA4P48169 554 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 DAPP51397 102 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 TSPEAR-AS2P59090 65 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 TAS2R45P59539 299 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 MYL6P60660 151 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 SNAP25P60880 206 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 HERVK_113P63121 156 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 FOXF1Q12946 379 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 RASL11AQ6T310 242 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 ATP5L2Q7Z4Y8 100 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 OR2D3Q8NGH3 330 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 Q8WTZ3 238 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 TMBIM1Q969X1 311 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 MS4A6EQ96DS6 147 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 CPNE2Q96FN4 548 aaPredicted RBP1.2□□□□□ -2.22
SCFD1-217ENST00000555953 MBOAT7Q96N66 472 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 MGLLQ99685 303 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 CDCA4Q9BXL8 241 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 CXCL16Q9H2A7 254 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 MS4A6AQ9H2W1 248 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 C16orf95Q9H693 158 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 PLEKHJ1Q9NW61 149 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 FAM206AQ9NX38 181 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 UBAP1Q9NZ09 502 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 HDGFL3Q9Y3E1 203 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 ATP6V1DQ9Y5K8 247 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 ICE1Q9Y2F5 2266 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 DSCAMO60469 2012 aa1.2□□□□□ -2.22
SCFD1-217ENST00000555953 TRGV4A0A0C4DH28 118 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 A0A0J9YX75 114 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 TINCRA0A1B0GVN0 87 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 C19orf71A6NCJ1 209 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 F5H768 121 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 LY6LH3BQJ8 138 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 SLC17A3O00476 420 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 MRASO14807 208 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 GSTZ1O43708 216 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-217ENST00000555953 PLCH2O75038 1416 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 IL6P05231 212 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 TPM3P06753 285 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 ZNF7P17097 686 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-217ENST00000555953 COL5A3P25940 1745 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-217ENST00000555953 IFNGR2P38484 337 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 CA7P43166 264 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 TPM4P67936 248 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 FABP5Q01469 135 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 COTL1Q14019 142 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 CDKL4Q5MAI5 379 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 Q8N402 240 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 TMEM251Q8N6I4 163 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 Q8NDZ9 215 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 WDR90Q96KV7 1748 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 DNAJC30Q96LL9 226 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 KCTD7Q96MP8 289 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 TXNL4BQ9NX01 149 aaKnown RBP1.19□□□□□ -2.22
SCFD1-217ENST00000555953 EMC3Q9P0I2 261 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 MAP3K5Q99683 1374 aa1.19□□□□□ -2.22
SCFD1-217ENST00000555953 IGHV3-73A0A0B4J1V6 119 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 VPS37CA5D8V6 355 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-217ENST00000555953 TMEM235A6NFC5 223 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 KNCNA6PVL3 124 aa1.18□□□□□ -2.22
SCFD1-217ENST00000555953 OCM2P0CE71 109 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms