RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 CTDSPLO15194 276 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 TBR1Q16650 682 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM54Q969K7 222 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 GPX7Q96SL4 187 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-220ENST00000555612 ICE1Q9Y2F5 2266 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 IGKV1D-42A0A075B6H8 117 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 CORTO00230 105 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 IGKV3-20P01619 116 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 TRGV3P03979 118 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 RD3LP0DJH9 198 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 AMMECR1LQ6DCA0 310 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 SIGIRRQ6IA17 410 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 MRPL54Q6P161 138 aaKnown RBP7.04□□□□□ -1.28
SYNE2-220ENST00000555612 LDLRAD3Q86YD5 345 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 CHRNA10Q9GZZ6 450 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 SLC35B3Q9H1N7 401 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 HELTA6NFD8 242 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 MELTFP08582 738 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 LINC00869P0C866 280 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 RCC1P18754 421 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-220ENST00000555612 CRYBA2P53672 197 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM97Q5BJF2 176 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 SLC35E4Q6ICL7 350 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 FAM210BQ96KR6 192 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 IGHV3OR16-13A0A075B7E8 117 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 IGHV3-74A0A0B4J1X5 117 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 ZG16O60844 167 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 CXorf1O96002 111 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 AREGP15514 252 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 TEX261Q6UWH6 196 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 OR4X2Q8NGF9 303 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 MARVELD3Q96A59 401 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM186Q96B77 213 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 SCMH1Q96GD3 660 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 U3KQ87 197 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 RBFOX3A6NFN3 312 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 DEDDO75618 318 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 ISG15P05161 165 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 CFHR1Q03591 330 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 C1QTNF12Q5T7M4 302 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 LRRC75AQ8NAA5 344 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 EEF1AKMT3Q96AZ1 226 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 NPIPB11E5RHQ5 1161 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
SYNE2-220ENST00000555612 OR10G8Q8NGN5 311 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM45BQ96B21 275 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 NIT2Q9NQR4 276 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 COL11A1P12107 1806 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-220ENST00000555612 IGHV2OR16-5A0A0B4J2B6 119 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 GNLYP22749 145 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 SLC35E3Q7Z769 313 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 FAM216BQ8N7L0 139 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 GPHA2Q96T91 129 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 ELOVL1Q9BW60 279 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 LINC00470Q9BZP3 86 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 MYO16Q9Y6X6 1858 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 OR2A4O95047 310 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 SSTR5P35346 364 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 DNM1P46Q6ZS02 220 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 EIF4E3Q8N5X7 224 aaKnown RBP7.03□□□□□ -1.28
SYNE2-220ENST00000555612 WDYHV1Q96HA8 205 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 IMMP1LQ96LU5 166 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 OR2A7Q96R45 310 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 GP6Q9HCN6 339 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 NPVFQ9HCQ7 196 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 JPT1Q9UK76 154 aa7.03□□□□□ -1.28
SYNE2-220ENST00000555612 DUXBA0A1W2PPF3 345 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 IGHV3-23P01764 117 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 MUC1P15941 1255 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-220ENST00000555612 FSTP19883 344 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 IGHV1-2P23083 117 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 NPBWR2P48146 333 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 AANATQ16613 207 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 BSXQ3C1V8 233 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 WDR73Q6P4I2 378 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 ZNF841Q6ZN19 808 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 Q6ZN92 141 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 OR4C13Q8NGP0 309 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 SEC11CQ9BY50 192 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 AURKAIP1Q9NWT8 199 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-220ENST00000555612 NAT8Q9UHE5 227 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 KCNK7Q9Y2U2 307 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 MOGAT2Q3SYC2 334 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 LAIR2Q6ISS4 152 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 TOMM20LQ6UXN7 152 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 SYT8Q8NBV8 401 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 PTGDSP41222 190 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 VKORC1L1Q8N0U8 176 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 OR2D3Q8NGH3 330 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 PXMP4Q9Y6I8 212 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 SBF2Q86WG5 1849 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 ADAM11O75078 769 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 IFI6P09912 130 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 C19orf35Q6ZS72 473 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 OR5P3Q8WZ94 311 aa7.02□□□□□ -1.29
SYNE2-220ENST00000555612 ZNF107Q9UII5 783 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-220ENST00000555612 ZIC3O60481 467 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms