RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 C12orf54Q6X4T0 127 aa16.54■□□□□ 0.24
FOXN3-209ENST00000555353 GIMAP1Q8WWP7 306 aa16.54■□□□□ 0.24
FOXN3-209ENST00000555353 EDARADDQ8WWZ3 215 aa16.54■□□□□ 0.24
FOXN3-209ENST00000555353 OR1A1Q9P1Q5 309 aa16.54■□□□□ 0.24
FOXN3-209ENST00000555353 TBC1D24Q9ULP9 559 aa16.54■□□□□ 0.24
FOXN3-209ENST00000555353 OOSP1A8MZH6 123 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 YPEL1O60688 119 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 BRS3P32247 399 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 DYNLT3P51808 116 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 HERV-K104P61576 105 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 Q3ZCU0 254 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 CCDC144NLQ6NUI1 221 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 H1FOOQ8IZA3 346 aaPredicted RBP16.53■□□□□ 0.24
FOXN3-209ENST00000555353 C8orf31Q8N9H6 132 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 OR10V1Q8NGI7 309 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 PIFOQ8TCI5 191 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 TAF15Q92804 592 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■□□□ 11.9
FOXN3-209ENST00000555353 TOMM40LQ969M1 308 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 YPEL2Q96QA6 119 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 ZNF2Q9BSG1 426 aaPredicted RBP16.53■□□□□ 0.24
FOXN3-209ENST00000555353 TOLLIPQ9H0E2 274 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 C11orf54Q9H0W9 315 aaPredicted RBP16.53■□□□□ 0.24
FOXN3-209ENST00000555353 RAB18Q9NP72 206 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 SLC2A8Q9NY64 477 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 RDH8Q9NYR8 311 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 C1RLQ9NZP8 487 aa16.53■□□□□ 0.24
FOXN3-209ENST00000555353 LY6LH3BQJ8 138 aa16.52■□□□□ 0.24
FOXN3-209ENST00000555353 NFYAP23511 347 aaPredicted RBP16.52■□□□□ 0.24
FOXN3-209ENST00000555353 COMPP49747 757 aaPredicted RBP16.52■□□□□ 0.24
FOXN3-209ENST00000555353 FAM53AQ6NSI3 398 aaPredicted RBP16.52■□□□□ 0.24
FOXN3-209ENST00000555353 LIAT1Q6ZQX7 453 aa16.52■□□□□ 0.24
FOXN3-209ENST00000555353 OR51S1Q8NGJ8 323 aa16.52■□□□□ 0.24
FOXN3-209ENST00000555353 PITPNC1Q9UKF7 332 aa16.52■□□□□ 0.24
FOXN3-209ENST00000555353 OR2W1Q9Y3N9 320 aa16.52■□□□□ 0.24
FOXN3-209ENST00000555353 RBM7Q9Y580 266 aaKnown RBP16.52■□□□□ 0.24
FOXN3-209ENST00000555353 ZNF735P0CB33 412 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 PPP1CCP36873 323 aaKnown RBP16.51■□□□□ 0.23
FOXN3-209ENST00000555353 ECI1P42126 302 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 RAG2P55895 527 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 GNMTQ14749 295 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 MORN2Q502X0 79 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 AWAT1Q58HT5 328 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 LY6G6FQ5SQ64 297 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 LINC00311Q8N616 119 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 OR4F5Q8NH21 305 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 TERB2Q8NHR7 220 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 TCF19Q9Y242 345 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 PPYP01298 95 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 IL3RAP26951 378 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 IDO2Q6ZQW0 420 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 OR2AK2Q8NG84 335 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 ENKURQ8TC29 256 aa16.51■□□□□ 0.23
FOXN3-209ENST00000555353 FAM240BA0A1B0GVZ2 78 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 ITGB1BP1O14713 200 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 TUSC2O75896 110 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 NDUFA7O95182 113 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 AADACP22760 399 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 RAB7AP51149 207 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 LUMP51884 338 aaPredicted RBP16.5■□□□□ 0.23
FOXN3-209ENST00000555353 RELBQ01201 579 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 RGS21Q2M5E4 152 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 ZNF660Q6AZW8 331 aaPredicted RBP16.5■□□□□ 0.23
FOXN3-209ENST00000555353 SCGB3A2Q96PL1 93 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 COPZ2Q9P299 210 aa16.5■□□□□ 0.23
FOXN3-209ENST00000555353 SLC25A48Q6ZT89 311 aaKnown RBP16.49■□□□□ 0.23
FOXN3-209ENST00000555353 C3orf56Q8N813 242 aa16.49■□□□□ 0.23
FOXN3-209ENST00000555353 ZNF439Q8NDP4 499 aa16.49■□□□□ 0.23
FOXN3-209ENST00000555353 MOB3AQ96BX8 217 aa16.49■□□□□ 0.23
FOXN3-209ENST00000555353 SLC25A21Q9BQT8 299 aaPredicted RBP16.49■□□□□ 0.23
FOXN3-209ENST00000555353 HSD17B6O14756 317 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 SLC31A2O15432 143 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 PTTG1O95997 202 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 FXYD4P59646 89 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 RBMS2Q15434 407 aaKnown RBP16.48■□□□□ 0.23
FOXN3-209ENST00000555353 CT45A1Q5HYN5 189 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 LPCAT3Q6P1A2 487 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 LHFPL1Q86WI0 220 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 TMEM219Q86XT9 240 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 CT45A3Q8NHU0 189 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 ABHD14AQ9BUJ0 271 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 BEX1Q9HBH7 125 aa16.48■□□□□ 0.23
FOXN3-209ENST00000555353 A0A1B0GUS0 222 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 A6NDX4 124 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 PGAM2P15259 253 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 MDKP21741 143 aaPredicted RBP16.47■□□□□ 0.23
FOXN3-209ENST00000555353 CD24P25063 80 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 SLC6A1P30531 599 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 ZNF134P52741 427 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 DIAPH2-AS1Q14236 149 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 SURF2Q15527 256 aaPredicted RBP16.47■□□□□ 0.23
FOXN3-209ENST00000555353 OR8H3Q8N146 312 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 NPFFR1Q9GZQ6 430 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 GHITMQ9H3K2 345 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 OR5H14A6NHG9 310 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 CHST1O43916 411 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 SLC22A5O76082 557 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 GAPDHP04406 335 aaKnown RBP16.47■□□□□ 0.23
FOXN3-209ENST00000555353 OR8U9P0C7N5 309 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 BTCP35070 178 aa16.47■□□□□ 0.23
FOXN3-209ENST00000555353 CCR6P51684 374 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms