RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 CASC10Q5T4H9 136 aa12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 OVCH2Q7RTZ1 564 aa12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 PPP1R27Q86WC6 154 aa12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 FAM103A1Q9BTL3 118 aaKnown RBP12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 TMED9Q9BVK6 235 aa12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 LPAR5Q9H1C0 372 aa12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 RIMS4Q9H426 269 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 CHMP1AQ9HD42 196 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
ARHGEF40-205ENST00000555052 TRIM64CA6NLI5 447 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 H7C2Y5 167 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 CDK1P06493 297 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 GSTP1P09211 210 aaKnown RBP12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 UCHL1P09936 223 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 OR8U9P0C7N5 309 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 SRMP19623 302 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 PSG5Q15238 335 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 RCN1Q15293 331 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 HSD17B12Q53GQ0 312 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 OGFRL1Q5TC84 451 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 ZNF562Q6V9R5 426 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 FAM89BQ8N5H3 189 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 LFNGQ8NES3 379 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 OR6M1Q8NGM8 313 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 EDARADDQ8WWZ3 215 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 PTX4Q96A99 478 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 RHOVQ96L33 236 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 MND1Q9BWT6 205 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 PLEKHJ1Q9NW61 149 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 AK3Q9UIJ7 227 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 RNF150Q9ULK6 438 aa12.06□□□□□ -0.48
ARHGEF40-205ENST00000555052 SOCS1O15524 211 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 SPDEFO95238 335 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 CA2P00918 260 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 IGKV1-16P04430 117 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 HSPB1P04792 205 aaKnown RBP12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 CEACAM6P40199 344 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 CEACAM19Q7Z692 300 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 ZNF383Q8NA42 475 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 SETD6Q8TBK2 473 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 ABHD5Q8WTS1 349 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 GFI1Q99684 422 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 SLA2Q9H6Q3 261 aa12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 METTL1Q9UBP6 276 aaKnown RBP12.05□□□□□ -0.48
ARHGEF40-205ENST00000555052 IGKV1-6A0A0C4DH72 117 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 CASQ2O14958 399 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 ARPC1BO15143 372 aaKnown RBP12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 TFAP2AP05549 437 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 ZBTB25P24278 435 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 LINC00205P59089 165 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 TPPP2P59282 170 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 SSBP2P81877 361 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 PITPNAQ00169 270 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 SPHARQ15513 63 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 DRAXINQ8NBI3 349 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 FLYWCH2Q96CP2 140 aaKnown RBP12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 MS4A10Q96PG2 267 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 CLCC1Q96S66 551 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 TSNAXQ99598 290 aaKnown RBP12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 Q9N2K0 584 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 C12orf4Q9NQ89 552 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 HSF4Q9ULV5 492 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 MGAT4AQ9UM21 535 aa12.04□□□□□ -0.48
ARHGEF40-205ENST00000555052 SLC17A2O00624 439 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 HSPA12AO43301 675 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 SCTP09683 121 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 CPEP16870 476 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 TMEM50BP56557 158 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 IRF3Q14653 427 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 P2RY14Q15391 338 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 OR4C12Q96R67 309 aa12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 URM1Q9BTM9 101 aaKnown RBP12.03□□□□□ -0.48
ARHGEF40-205ENST00000555052 BIRC6Q9NR09 4857 aa12.02□□□□□ -0.48
ARHGEF40-205ENST00000555052 IGLV1-51P01701 117 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 TRGV3P03979 118 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 ARSBP15848 533 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 LIPKQ5VXJ0 399 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 TMEM91Q6ZNR0 172 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 PDPNQ86YL7 162 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 Q8N1Y9 231 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 POC5Q8NA72 575 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 ARHGAP5-AS1Q96IT6 56 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 TM2D3Q9BRN9 247 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 STUB1Q9UNE7 303 aa12.02□□□□□ -0.49
ARHGEF40-205ENST00000555052 ALMS1Q8TCU4 4167 aa12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 PTGES3LE9PB15 166 aa12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 H3BUA1 57 aa12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 SLC25A17O43808 307 aa12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 IGLV2-23P01705 113 aa12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 IGHV4-30-4P0DP06 118 aa12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 CD40LGP29965 261 aa12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 RPS16P62249 146 aaKnown RBP12.01□□□□□ -0.49
ARHGEF40-205ENST00000555052 FXYD3Q14802 87 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms