RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 NUP37Q8NFH4 326 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 ABHD14AQ9BUJ0 271 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 TUBA4BQ9H853 241 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 ELOVL5Q9NYP7 299 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 IL19Q9UHD0 177 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 PSG11Q9UQ72 335 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 FAM90A9PA6NNJ1 464 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 PRRG2O14669 202 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 GPR37O15354 613 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 NFYBP25208 207 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 G6PCP35575 357 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 BRWD1-AS2P59051 145 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 RHEBQ15382 184 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 SPANXN5Q5MJ07 72 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 HAPLN4Q86UW8 402 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 C15orf54Q8N8G6 183 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 PINX1Q96BK5 328 aaKnown RBP17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 C14orf79Q96F83 325 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 AIFM2Q9BRQ8 373 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 MRPL37Q9BZE1 423 aaKnown RBP17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 TIMM9Q9Y5J7 89 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 RFNGQ9Y644 331 aa17.71■□□□□ 0.43
ARHGEF40-204ENST00000555038 ATP6V1G2-DDX39BF2Z307 99 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 GPR12P47775 334 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 ARL16Q0P5N6 197 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 Q3ZCU0 254 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 MORN2Q502X0 79 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 H2BFWTQ7Z2G1 175 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 ZNF561Q8N587 486 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 RFESDQ8TAC1 157 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 ITLN1Q8WWA0 313 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 GNG12Q9UBI6 72 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 GAB2Q9UQC2 676 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 LOC400499M0QZD8 3231 aa17.7■□□□□ 0.42
ARHGEF40-204ENST00000555038 ST8SIA5O15466 376 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 RBFOX2O43251 390 aaKnown RBP eCLIP17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 SPRY3O43610 288 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 HSPB1P04792 205 aaKnown RBP17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 TNFSF4P23510 183 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 CD40P25942 277 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 ZNF506Q5JVG8 444 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 ALKBH2Q6NS38 261 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 WDR61Q9GZS3 305 aaKnown RBP17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 RNF7Q9UBF6 113 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 PRR14LQ5THK1 2151 aa17.69■□□□□ 0.42
ARHGEF40-204ENST00000555038 IGHV3-43A0A0B4J1X8 118 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 MED19A0JLT2 244 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 IGHV3-43DP0DP04 118 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 TDGF1P3P51864 188 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 CCL20P78556 96 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 SLC38A11Q08AI6 406 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 AWAT1Q58HT5 328 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 SOHLH1Q5JUK2 328 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 FAM53AQ6NSI3 398 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 VHLLQ6RSH7 139 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 BTNL3Q6UXE8 466 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 Q8TCH9 128 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 SFT2D1Q8WV19 159 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 SDSLQ96GA7 329 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 ESRP2Q9H6T0 727 aaKnown RBP17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 LINC00473A8K010 186 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 DUTP33316 252 aaKnown RBP17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 FAM27E3Q08E93 113 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 AARDQ4LEZ3 155 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 KHDC3LQ587J8 217 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 OR2B11Q5JQS5 317 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 MBD3L1Q8WWY6 194 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 MLXQ9UH92 298 aa17.68■□□□□ 0.42
ARHGEF40-204ENST00000555038 BMP5P22003 454 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 KIR2DS2P43631 304 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 RAB7AP51149 207 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 TNFAIP6P98066 277 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 TMEM30BQ3MIR4 351 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 TMEM108Q6UXF1 575 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 ASCL5Q7RTU5 278 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 CENPVQ7Z7K6 275 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 OR10G4Q8NGN3 311 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 DCTN5Q9BTE1 182 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 FAM234AQ9H0X4 552 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 PRELID3BQ9Y3B1 194 aa17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 PRRC2CQ9Y520 2896 aaKnown RBP17.67■□□□□ 0.42
ARHGEF40-204ENST00000555038 IGHV3OR15-7A0A075B7D8 119 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 A0A1B0GV50 99 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 C7orf77A4D0Y5 90 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 HPRT1P00492 218 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 CGB3P0DN86 165 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 CGB7P0DN87 165 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 FOLR2P14207 255 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 LOXL3P58215 753 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 AVPI1Q5T686 147 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 DOLPP1Q86YN1 238 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 CLDND2Q8NHS1 167 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 DTD1Q8TEA8 209 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 TAF15Q92804 592 aaKnown RBP eCLIP17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 ABHD17AQ96GS6 310 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 OR4C12Q96R67 309 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 DIRC2Q96SL1 478 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 EGLN1Q9GZT9 426 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 RPS10P5Q9NQ39 176 aa17.66■□□□□ 0.42
ARHGEF40-204ENST00000555038 CALYQ9NYX4 217 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms