RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SLC33A1O00400 549 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-215ENST00000554656 DIRAS3O95661 229 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 OR2H2O95918 312 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 CTXN2P0C2S0 81 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 OR3A1P47881 315 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 SURF2Q15527 256 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-215ENST00000554656 PAN3Q58A45 887 aaKnown RBP8.45□□□□□ -1.06
SHMT2-215ENST00000554656 UTF1Q5T230 341 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 MINOS1Q5TGZ0 78 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 OR52W1Q6IF63 320 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 OVCH2Q7RTZ1 564 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 REC114Q7Z4M0 266 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 LHFPL1Q86WI0 220 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 OR4P4Q8NGL7 312 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 MRAPQ8TCY5 172 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 NEK7Q8TDX7 302 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 CCDC107Q8WV48 283 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 GINS4Q9BRT9 223 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 ST6GALNAC5Q9BVH7 336 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 DPCDQ9BVM2 203 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-215ENST00000554656 TMEM133Q9H2Q1 129 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 NECAP2Q9NVZ3 263 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 ETAA1Q9NY74 926 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 ALG5Q9Y673 324 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 MINOS1-NBL1R4GNA1 71 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 TRAV6A0A075B6T7 132 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 A0A0B4J293 547 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 hADV38S2A0JD32 116 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 SNRPGP15A8MWD9 76 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 CSN2P05814 226 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 CD24P25063 80 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 VDAC2P45880 294 aaPredicted RBP8.44□□□□□ -1.06
SHMT2-215ENST00000554656 RAB25P57735 213 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 ARPC4P59998 168 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 UBE2MP61081 183 aaKnown RBP8.44□□□□□ -1.06
SHMT2-215ENST00000554656 CD83Q01151 205 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 PRAMEF5Q5TYX0 476 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 FAAP20Q6NZ36 180 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 C10orf99Q6UWK7 81 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 GLDNQ6ZMI3 551 aaPredicted RBP8.44□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF497Q6ZNH5 498 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 IDO2Q6ZQW0 420 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF554Q86TJ5 538 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 OR4F17Q8NGA8 305 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 OR13C8Q8NGS7 320 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 TERB2Q8NHR7 220 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 OR4F4Q96R69 305 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 NEURL2Q9BR09 285 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 CLEC7AQ9BXN2 247 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 GHITMQ9H3K2 345 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 NCOR1P1Q9H4R4 102 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 GPN1Q9HCN4 374 aaPredicted RBP8.44□□□□□ -1.06
SHMT2-215ENST00000554656 CHMP1AQ9HD42 196 aaPredicted RBP8.44□□□□□ -1.06
SHMT2-215ENST00000554656 Q9N2K0 584 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 EHFQ9NZC4 300 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF581Q9P0T4 197 aa8.44□□□□□ -1.06
SHMT2-215ENST00000554656 NBEAL2Q6ZNJ1 2754 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 FAM172BPA6NC97 362 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 ARPC1BO15143 372 aaKnown RBP8.43□□□□□ -1.06
SHMT2-215ENST00000554656 PMP2P02689 132 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 AMY1AP04745 511 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 IGLL1P15814 213 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 P2RX3P56373 397 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 LOXL3P58215 753 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 TAS2R31P59538 309 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 RRAS2P62070 204 aaPredicted RBP8.43□□□□□ -1.06
SHMT2-215ENST00000554656 TSPAN5P62079 268 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 DHRS11Q6UWP2 260 aa8.43□□□□□ -1.06
SHMT2-215ENST00000554656 MRPL30Q8TCC3 161 aaKnown RBP8.43□□□□□ -1.06
SHMT2-215ENST00000554656 HDHD3Q9BSH5 251 aaPredicted RBP8.43□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF230Q9UIE0 474 aaPredicted RBP8.43□□□□□ -1.06
SHMT2-215ENST00000554656 TMEM30CPA0ZSE6 113 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 SH2D7A6NKC9 451 aaPredicted RBP8.42□□□□□ -1.06
SHMT2-215ENST00000554656 TRDCB7Z8K6 153 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 NPIPB11E5RHQ5 1161 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 SIRPB1O00241 398 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 MGST3O14880 152 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 IGLV1-47P01700 117 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 ERP29P30040 261 aaKnown RBP8.42□□□□□ -1.06
SHMT2-215ENST00000554656 GLP1RP43220 463 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 GLIPR1P48060 266 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 HLA-DRB3P79483 266 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 SCGB2B2Q4G0G5 96 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
SHMT2-215ENST00000554656 TRAT1Q6PIZ9 186 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 AKAP14Q86UN6 197 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 WFDC9Q8NEX5 89 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 OR5AU1Q8NGC0 362 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 OR4A4PQ8NGN8 299 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 OR6F1Q8NGZ6 308 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 GIMAP1Q8WWP7 306 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 COQ2Q96H96 371 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 CABLES2Q9BTV7 478 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 OR51J1Q9H342 316 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 MBNL3Q9NUK0 354 aaKnown RBP8.42□□□□□ -1.06
SHMT2-215ENST00000554656 GPR132Q9UNW8 380 aa8.42□□□□□ -1.06
SHMT2-215ENST00000554656 UBE2J1Q9Y385 318 aaPredicted RBP8.42□□□□□ -1.06
SHMT2-215ENST00000554656 IGKV1D-8A0A087WSZ0 117 aa8.41□□□□□ -1.06
SHMT2-215ENST00000554656 K7EIL1 84 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms