RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 TXNL1O43396 289 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 PROP1O75360 226 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 SLC22A5O76082 557 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 IGLV2-14P01704 120 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 FAUP35544 74 aaKnown RBP9.86□□□□□ -0.83
SHMT2-209ENST00000553949 IER3P46695 156 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 DYNLT3P51808 116 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 BAMBIQ13145 260 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 AANATQ16613 207 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 LRRC75BQ2VPJ9 315 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 AADACL3Q5VUY0 350 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 MOB3BQ86TA1 216 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 LHFPL1Q86WI0 220 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 DRAM1Q8N682 238 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 SECTM1Q8WVN6 248 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 DEDD2Q8WXF8 326 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 SSX3Q99909 188 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 MRPL20Q9BYC9 149 aaKnown RBP9.86□□□□□ -0.83
SHMT2-209ENST00000553949 SLC5A7Q9GZV3 580 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 FXYD6Q9H0Q3 95 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 HRASLSQ9HDD0 168 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 CCL28Q9NRJ3 127 aa9.86□□□□□ -0.83
SHMT2-209ENST00000553949 M0R1X1 148 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 HOXA3O43365 443 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-209ENST00000553949 IGHV4-59P01825 116 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 BRS3P32247 399 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 RAB13P51153 203 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 HABP2Q14520 560 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-209ENST00000553949 SCGB2B2Q4G0G5 96 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 OR51S1Q8NGJ8 323 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 TERB2Q8NHR7 220 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 PIFOQ8TCI5 191 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 SSMEM1Q8WWF3 244 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 CFHR4Q92496 578 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 PRRT1Q99946 306 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 NABP2Q9BQ15 211 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 DPAGT1Q9H3H5 408 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 ABCB10Q9NRK6 738 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 MCUBQ9NWR8 336 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 ZFHX3Q15911 3703 aa9.85□□□□□ -0.83
SHMT2-209ENST00000553949 IGHV3-72A0A0B4J1Y9 119 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 LINC00854A0A1B0GVQ3 168 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 H3BUX3 64 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 CT45A6P0DMU7 189 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 CT45A5P0DMU8 189 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 CT45A7P0DMV0 189 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 GNRHRP30968 328 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 HILS1P60008 231 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 SLC9A3R2Q15599 337 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 MSMO1Q15800 293 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 ZNF818PQ6ZRF7 136 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 TMEM86BQ8N661 226 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 DRAXINQ8NBI3 349 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-209ENST00000553949 OR5R1Q8NH85 324 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 ESM1Q9NQ30 184 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 TNFRSF19Q9NS68 423 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 SLC2A8Q9NY64 477 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 SCP2D1Q9UJQ7 156 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 CUBNO60494 3623 aa9.84□□□□□ -0.83
SHMT2-209ENST00000553949 BTBD17A6NE02 478 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 DNAJC9-AS1A6NH13 148 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 FAM90A9PA6NNJ1 464 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 CLDN34H7C241 214 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 TCF21O43680 179 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 UPK1BO75841 260 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 IFNA2P01563 188 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 CD24P25063 80 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 UCP3P55916 312 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 LINC00205P59089 165 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 EIF4EBP1Q13541 118 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-209ENST00000553949 LPCAT3Q6P1A2 487 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 GLDNQ6ZMI3 551 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-209ENST00000553949 IDO2Q6ZQW0 420 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 SLC38A6Q8IZM9 456 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 ZDHHC22Q8N966 263 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 ZNF383Q8NA42 475 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 ZBTB34Q8NCN2 500 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 BVESQ8NE79 360 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 OR13C8Q8NGS7 320 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 CAPSLQ8WWF8 208 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 BORCS5Q969J3 196 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 MRGPRFQ96AM1 343 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 AKR1E2Q96JD6 320 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 DUX5Q96PT3 197 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 JMJD8Q96S16 334 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 TSC22D3Q99576 134 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 VPREB3Q9UKI3 123 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 POMT1Q9Y6A1 747 aa9.83□□□□□ -0.84
SHMT2-209ENST00000553949 A0A0A6YYJ9 748 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 NAP1L6A6NFF2 107 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 H0YJW9 148 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 GPR31O00270 319 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 TNFSF12O43508 249 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 IGKV1D-33P01593 117 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 IGKV1-33P01594 117 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 SNRNP70P08621 437 aaKnown RBP9.82□□□□□ -0.84
SHMT2-209ENST00000553949 PGAM2P15259 253 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 CD1BP29016 333 aa9.82□□□□□ -0.84
SHMT2-209ENST00000553949 DUTP33316 252 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms