RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 REPIN1Q9BWE0 567 aaKnown RBP10.4□□□□□ -0.74
SHMT2-207ENST00000553837 RPRMQ9NS64 109 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 IL36RNQ9UBH0 155 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 DUXBA0A1W2PPF3 345 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 C5orf49A4QMS7 147 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 ADAM20O43506 726 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 PDCD6O75340 191 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 TMEM50AO95807 157 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 MT-CO3P00414 261 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 HPRT1P00492 218 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 AADACP22760 399 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 TNFSF10P50591 281 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 RAB7AP51149 207 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 PRDX4Q13162 271 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 NRN1LQ496H8 165 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 ATP1A1-AS1Q5TC04 95 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 DHRS13Q6UX07 377 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 TNFRSF14Q92956 283 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 PARD6GQ9BYG4 376 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-207ENST00000553837 PLSCR2Q9NRY7 297 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 OR6C3Q9NZP0 311 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 RPH3ALQ9UNE2 315 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 ZNF705FA8MVS1 300 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-207ENST00000553837 C21orf140B9A014 251 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 TYMSP04818 313 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 ZNF705DP0CH99 300 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-207ENST00000553837 ZNF705BP0CI00 300 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-207ENST00000553837 BCL3P20749 454 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 CEACAM8P31997 349 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-207ENST00000553837 CNN1P51911 297 aaKnown RBP10.39□□□□□ -0.75
SHMT2-207ENST00000553837 OR2T10Q8NGZ9 312 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 ANAPC16Q96DE5 110 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 DOCK7Q96N67 2140 aa10.39□□□□□ -0.75
SHMT2-207ENST00000553837 MAP1LC3B2A6NCE7 125 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 LILRA1O75019 489 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 OR7C1O76099 320 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 KBTBD11O94819 623 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 SELEP16581 610 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 SRP14P37108 136 aaKnown RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 GPM6AP51674 278 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 GNB2P62879 340 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 IGFBP7Q16270 282 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 TBC1D26Q86UD7 250 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 MAP1LC3BQ9GZQ8 125 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 CSTL1Q9H114 145 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 OR51I2Q9H344 312 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 AURKAIP1Q9NWT8 199 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 B4GALT7Q9UBV7 327 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 R4GN57 208 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 SS18L1O75177 396 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 ZNF737O75373 536 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 PPYP01298 95 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 VDAC1P21796 283 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 CHRNB4P30926 498 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 MEOX1P50221 254 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 FGF8P55075 233 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 MALLQ13021 153 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 Q8NFD4 153 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 MS4A10Q96PG2 267 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 TBX15Q96SF7 602 aa10.38□□□□□ -0.75
SHMT2-207ENST00000553837 ALKBH7Q9BT30 221 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-207ENST00000553837 SYNGR4O95473 234 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 PAX9P55771 341 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 SERF2P84101 59 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 PLGLB1Q02325 96 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 ZNF726P1Q15940 193 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 NMSQ5H8A3 153 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 RNFT1Q5M7Z0 435 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 CFAP161Q6P656 301 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 MDS2Q8NDY4 140 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 SLC35E1Q96K37 410 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 POM121L2Q96KW2 1035 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 TECTBQ96PL2 329 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 ZNF552Q9H707 407 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-207ENST00000553837 ZNF442Q9H7R0 627 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 MTCH1Q9NZJ7 389 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 LOC400499M0QZD8 3231 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 SPENQ96T58 3664 aaKnown RBP10.37□□□□□ -0.75
SHMT2-207ENST00000553837 ASPMQ8IZT6 3477 aa10.37□□□□□ -0.75
SHMT2-207ENST00000553837 TNFSF15O95150 251 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 SP1P08047 785 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 GNRHRP30968 328 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 SPIN3Q5JUX0 258 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 TMEM164Q5U3C3 297 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 ZCCHC14Q8WYQ9 949 aaKnown RBP10.36□□□□□ -0.75
SHMT2-207ENST00000553837 APH1AQ96BI3 265 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 BTF3L4Q96K17 158 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 RBKSQ9H477 322 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 RNF115Q9Y4L5 304 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 ARHGAP21Q5T5U3 1957 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 TRAV39A0A0B4J263 110 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 CCL25O15444 150 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 SYNGR1O43759 233 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 TNFSF13O75888 250 aa10.36□□□□□ -0.75
SHMT2-207ENST00000553837 APOBEC3AP31941 199 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms