RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
MTHFD1-204ENST00000553405 MOB3AQ96BX8 217 aa11.91□□□□□ -0.5
MTHFD1-204ENST00000553405 MRPL20Q9BYC9 149 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-204ENST00000553405 CHIAQ9BZP6 476 aa11.91□□□□□ -0.5
MTHFD1-204ENST00000553405 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
MTHFD1-204ENST00000553405 OR2D2Q9H210 308 aa11.91□□□□□ -0.5
MTHFD1-204ENST00000553405 SDHAF2Q9NX18 166 aa11.91□□□□□ -0.5
MTHFD1-204ENST00000553405 A6NDX4 124 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 H3BUX3 64 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 TCF21O43680 179 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 GAPDHP04406 335 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 LINC00205P59089 165 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 TAS2R19P59542 299 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 UBA52P62987 128 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 MSMO1Q15800 293 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 CCDC144NLQ6NUI1 221 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 STEAP1BQ6NZ63 245 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 TGIF2LXQ8IUE1 241 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 Q8N6K4 173 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 OR4C16Q8NGL9 310 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 OR56B4Q8NH76 319 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 DUX5Q96PT3 197 aa11.9□□□□□ -0.5
MTHFD1-204ENST00000553405 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 TXNL1O43396 289 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 CHST1O43916 411 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 CSF1P09603 554 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 CD24P25063 80 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 GPR12P47775 334 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 LUMP51884 338 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 LSAMPQ13449 338 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 FAAP20Q6NZ36 180 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 THNSL2Q86YJ6 484 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 ARRDC1Q8N5I2 433 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 OR5R1Q8NH85 324 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 DDB2Q92466 427 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 ZNF2Q9BSG1 426 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 TCF19Q9Y242 345 aa11.89□□□□□ -0.51
MTHFD1-204ENST00000553405 DNHD1Q96M86 4753 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 COL6A5A8TX70 2615 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 J3QRK9 145 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 GNRHRP30968 328 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 RNASE10Q5GAN6 216 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 RBMS3Q6XE24 437 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 ZNF645Q8N7E2 425 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 OR6F1Q8NGZ6 308 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 S1PR3Q99500 378 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 DPAGT1Q9H3H5 408 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 TAS2R8Q9NYW2 309 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 ZNF221Q9UK13 617 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 TENM1Q9UKZ4 2725 aa11.88□□□□□ -0.51
MTHFD1-204ENST00000553405 IGHV3-72A0A0B4J1Y9 119 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 LINC00473A8K010 186 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 H0YJW9 148 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 RAB3DO95716 219 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 IFNA2P01563 188 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 AKAIN1P0CW23 69 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 IL7P13232 177 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 CD1BP29016 333 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 DUTP33316 252 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 BRWD1-AS2P59051 145 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 RPL30P62888 115 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 GLDNQ6ZMI3 551 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 DRAXINQ8NBI3 349 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 CCL28Q9NRJ3 127 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 SLC2A8Q9NY64 477 aa11.87□□□□□ -0.51
MTHFD1-204ENST00000553405 M0R1X1 148 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 GPR137BO60478 399 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 AMY1AP04745 511 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 AMY2AP04746 511 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 BRS3P32247 399 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 PPP5CP53041 499 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 UCP3P55916 312 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 MEF2DQ14814 521 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 LY6EQ16553 131 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 ZNF818PQ6ZRF7 136 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 MOB3BQ86TA1 216 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 OR13C8Q8NGS7 320 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 S100ZQ8WXG8 99 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 EAF1Q96JC9 268 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 RITA1Q96K30 269 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 JMJD8Q96S16 334 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 GPHA2Q96T91 129 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 SLC5A7Q9GZV3 580 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 HRASLSQ9HDD0 168 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 PLSCR3Q9NRY6 295 aa11.86□□□□□ -0.51
MTHFD1-204ENST00000553405 SLC22A5O76082 557 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 IGKV1D-33P01593 117 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 IGKV1-33P01594 117 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 CD40LGP29965 261 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 FXYD4P59646 89 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 HERV-K104P61576 105 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 RELBQ01201 579 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 C16orf87Q6PH81 154 aa11.85□□□□□ -0.51
MTHFD1-204ENST00000553405 TMEM17Q86X19 198 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms