RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 MITFO75030 526 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SNNO75324 88 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SRSF10O75494 262 aaKnown RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 RBBP9O75884 186 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 S1PR2O95136 353 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CYB5AP00167 134 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 GIG44P09565 113 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 DNAH10OSP0CZ25 163 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SPI1P17947 270 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 GZMHP20718 246 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 FUT3P21217 361 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 NFYBP25208 207 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 IL3RAP26951 378 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 HSD11B1P28845 292 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 FMO3P31513 532 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 IFNA8P32881 189 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 REG1BP48304 166 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CRISP1P54107 249 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ATP1B3P54709 279 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 NME5P56597 212 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SELENOWP63302 87 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 DLK1P80370 383 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CRMP1Q14194 572 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 IRF3Q14653 427 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 OXA1LQ15070 435 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CDK5R1Q15078 307 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ECSCRQ19T08 205 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 RSBN1Q5VWQ0 802 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 LIPKQ5VXJ0 399 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF57Q68EA5 555 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 FAM71F2Q6NXP2 309 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 Q6P435 159 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 TBPL2Q6SJ96 375 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 UNQ5815/PRO19632Q6UWF5 114 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ASCL4Q6XD76 172 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF730Q6ZMV8 503 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 Q6ZSA8 131 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 LINC00596Q86U02 117 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 PPP1R27Q86WC6 154 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 FAM223AQ8IWN6 122 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SAXO1Q8IYX7 474 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SLC38A6Q8IZM9 456 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 FAM58AQ8N1B3 248 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 GAPTQ8N292 157 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 C17orf53Q8N3J3 647 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CSNK1G2-AS1Q8NCQ2 148 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 LFNGQ8NES3 379 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 OR1L6Q8NGR2 347 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 OR4K13Q8NH42 304 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 OR4A5Q8NH83 315 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 KCNG3Q8TAE7 436 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 DYNLRB2Q8TF09 96 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CASTOR1Q8WTX7 329 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 LEAP2Q969E1 77 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 OTULINQ96BN8 352 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 C10orf35Q96D05 121 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 LGALS12Q96DT0 336 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SPDL1Q96EA4 605 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 PGAM5Q96HS1 289 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 PPP1R36Q96LQ0 422 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 AMELYQ99218 206 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CGREF1Q99674 301 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 SCRT1Q9BWW7 348 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 DGCR6LQ9BY27 220 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 YTHDF1Q9BYJ9 559 aaKnown RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CHST5Q9GZS9 411 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 OR52D1Q9H346 318 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 Q9H3A6 140 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 EXOSC4Q9NPD3 245 aaKnown RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 RPS10P5Q9NQ39 176 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 CENPMQ9NSP4 180 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 RBFOX1Q9NWB1 397 aaKnown RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 RCC2Q9P258 522 aaKnown RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 LGALS13Q9UHV8 139 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF230Q9UIE0 474 aaPredicted RBP1.57□□□□□ -2.16
PTCH1-223ENST00000551623 KIF25Q9UIL4 384 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 LRP2P98164 4655 aa1.57□□□□□ -2.16
PTCH1-223ENST00000551623 TRAV24A0A0B4J272 114 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 IGKV1-12A0A0C4DH73 117 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 TEX48A0A1B0GUV7 120 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 TVP23AA6NH52 213 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 OR4C46A6NHA9 309 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 OR5H14A6NHG9 310 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 FXYD1O00168 92 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 FCN1O00602 326 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 UBDO15205 165 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF254O75437 659 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 NPPAP01160 153 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 IGKV1D-12P01611 117 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 TTRP02766 147 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SMR3BP02814 79 aaPredicted RBP1.56□□□□□ -2.16
PTCH1-223ENST00000551623 MT-ND2P03891 347 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 H2BFMP0C1H6 154 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 P0C879 139 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 ALOX5APP20292 161 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 PSMB6P28072 239 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 EPHA2P29317 976 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 PYCR1P32322 319 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 KDELR2P33947 212 aa1.56□□□□□ -2.16
PTCH1-223ENST00000551623 SSTR5P35346 364 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms