RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 TMEM267Q0VDI3 215 aaPredicted RBP17.36■□□□□ 0.37
PRDM4-205ENST00000550376 C17orf58Q2M2W7 97 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 NCR3LG1Q68D85 454 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 OR5C1Q8NGR4 320 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 ZNRD1Q9P1U0 126 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 SPTAN1Q13813 2472 aaKnown RBP17.36■□□□□ 0.37
PRDM4-205ENST00000550376 CACNA1AO00555 2505 aa17.36■□□□□ 0.37
PRDM4-205ENST00000550376 A0A1B0GU03 582 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 NCMAPQ5T1S8 102 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 PXDC1Q5TGL8 231 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 TCF23Q7RTU1 214 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 HSD17B13Q7Z5P4 300 aaPredicted RBP17.35■□□□□ 0.37
PRDM4-205ENST00000550376 ZNF561Q8N587 486 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 BPIFCQ8NFQ6 507 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 SESN1Q9Y6P5 492 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 HIVEP3Q5T1R4 2406 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 NDUFB7P17568 137 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 DYNLT3P51808 116 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 HTD2P86397 168 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 ADORA2A-AS1P86434 159 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 SPINK9Q5DT21 86 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 UBAC2Q8NBM4 344 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 SIAH2O43255 324 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 GPR12P47775 334 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 RNASE6Q93091 150 aaKnown RBP17.35■□□□□ 0.37
PRDM4-205ENST00000550376 MARC2Q969Z3 335 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 C14orf79Q96F83 325 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 SDSLQ96GA7 329 aa17.35■□□□□ 0.37
PRDM4-205ENST00000550376 FCN3O75636 299 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 GAPDHP04406 335 aaKnown RBP17.34■□□□□ 0.37
PRDM4-205ENST00000550376 ADH4P08319 380 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 ZNF788Q6ZQV5 615 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 DYNLRB1Q9NP97 96 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 KCNJ16Q9NPI9 418 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 A0A1B0GV50 99 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 LYNX1G3V0Z9 82 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 TXNL1O43396 289 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 LYNX1P0DP58 116 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 TNFRSF1AP19438 455 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 PAX5Q02548 391 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 VKORC1L1Q8N0U8 176 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 ST6GALNAC3Q8NDV1 305 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 Q8TCH9 128 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 ZNF665Q9H7R5 613 aa17.34■□□□□ 0.37
PRDM4-205ENST00000550376 CFAP46Q8IYW2 2715 aa17.33■□□□□ 0.37
PRDM4-205ENST00000550376 RPS16P62249 146 aaKnown RBP17.33■□□□□ 0.36
PRDM4-205ENST00000550376 SSX9Q7RTT3 188 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 LSM10Q969L4 123 aaKnown RBP17.33■□□□□ 0.36
PRDM4-205ENST00000550376 TOLLIPQ9H0E2 274 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 FAM96BQ9Y3D0 163 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 RNF212BA8MTL3 300 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 CGB3P0DN86 165 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 CGB7P0DN87 165 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 ZP3P21754 424 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 GNG10P50151 68 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 LYPD2Q6UXB3 125 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 ZCCHC14Q8WYQ9 949 aaKnown RBP17.33■□□□□ 0.36
PRDM4-205ENST00000550376 NGBQ9NPG2 151 aa17.33■□□□□ 0.36
PRDM4-205ENST00000550376 M0R1X1 148 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 SHOXO15266 292 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 EIF5AP63241 154 aaKnown RBP17.32■□□□□ 0.36
PRDM4-205ENST00000550376 OR6C3Q9NZP0 311 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 BORCS7-ASMTA0A0B4J1R7 106 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 SYNGR2O43760 224 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 FCGR3BO75015 233 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 APOC3P02656 99 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 METTL15P1P0C7V9 234 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 CHRNB4P30926 498 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 RUNX1Q01196 453 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 Q6ZRG5 221 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 MARVELD3Q96A59 401 aa17.32■□□□□ 0.36
PRDM4-205ENST00000550376 CISD1Q9NZ45 108 aaKnown RBP17.32■□□□□ 0.36
PRDM4-205ENST00000550376 SVEP1Q4LDE5 3571 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 CD3EP07766 207 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 SULT1A2P50226 295 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 CR1LQ2VPA4 569 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 CT45A1Q5HYN5 189 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 UNQ6494/PRO21346Q6UXR6 183 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 CT45A3Q8NHU0 189 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 ABHD14AQ9BUJ0 271 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 DSCAML1Q8TD84 2053 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 KBTBD11-OT1A0A1B0GTJ5 212 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 LRRC30A6NM36 301 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 WNT2P09544 360 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 ARL16Q0P5N6 197 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 CATR1Q13166 79 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 PRAMEF5Q5TYX0 476 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 TRAT1Q6PIZ9 186 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 ZBTB34Q8NCN2 500 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 CA5BP1Q8WTZ4 195 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 IFI27L2Q9H2X8 130 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 CLN8Q9UBY8 286 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 JPT1Q9UK76 154 aa17.31■□□□□ 0.36
PRDM4-205ENST00000550376 TRGV10A0A0A0MS01 117 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 F2RL2O00254 374 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 RBMXL2O75526 392 aaKnown RBP17.3■□□□□ 0.36
PRDM4-205ENST00000550376 MUC1P15941 1255 aaPredicted RBP17.3■□□□□ 0.36
PRDM4-205ENST00000550376 DUTP33316 252 aaKnown RBP17.3■□□□□ 0.36
PRDM4-205ENST00000550376 TAGLNQ01995 201 aaKnown RBP17.3■□□□□ 0.36
PRDM4-205ENST00000550376 HNF4GQ14541 408 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms