RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 A8MZ25 164 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 RBBP9O75884 186 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 MC5RP33032 325 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 LINC00205P59089 165 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 RPS27AP62979 156 aaKnown RBP11.79□□□□□ -0.52
RAB5C-205ENST00000550013 ZNF562Q6V9R5 426 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 GRPEL2Q8TAA5 225 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 AGMATQ9BSE5 352 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 TMEM59Q9BXS4 323 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 OR1A1Q9P1Q5 309 aa11.79□□□□□ -0.52
RAB5C-205ENST00000550013 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
RAB5C-205ENST00000550013 ANKRD34BA5PLL1 514 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 EFCAB10A6NFE3 127 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 ARPC1BO15143 372 aaKnown RBP11.78□□□□□ -0.52
RAB5C-205ENST00000550013 PROP1O75360 226 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 IGKV1-16P04430 117 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 TFAP2AP05549 437 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 CD1AP06126 327 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 UBBP0CG47 229 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 ARSBP15848 533 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 MAPK3P27361 379 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-205ENST00000550013 CD40LGP29965 261 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 UNC119Q13432 240 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 LRRTM1Q86UE6 522 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 RNF5Q99942 180 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 HDHD3Q9BSH5 251 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-205ENST00000550013 C11orf54Q9H0W9 315 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-205ENST00000550013 ZNF355PQ9NSJ1 428 aa11.78□□□□□ -0.52
RAB5C-205ENST00000550013 A0A0A6YYD4 124 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 ITGB1BP1O14713 200 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 MYL12BO14950 172 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 SLC22A1O15245 554 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 CPEP16870 476 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 CEACAM6P40199 344 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 VEGFCP49767 419 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 WNT4P56705 351 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 RPS16P62249 146 aaKnown RBP11.77□□□□□ -0.53
RAB5C-205ENST00000550013 DEFA5Q01523 94 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 FXYD3Q14802 87 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 HAGHQ16775 308 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 C1orf100Q5SVJ3 147 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 LAIR2Q6ISS4 152 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 MOB1BQ7L9L4 216 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 ZNF383Q8NA42 475 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 OR5T1Q8NG75 326 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 TSNAXQ99598 290 aaKnown RBP11.77□□□□□ -0.53
RAB5C-205ENST00000550013 SPATA25Q9BR10 227 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 TM2D1Q9BX74 207 aa11.77□□□□□ -0.53
RAB5C-205ENST00000550013 RANGRFQ9HD47 186 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-205ENST00000550013 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 SLC25A17O43808 307 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 ZP3P21754 424 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
RAB5C-205ENST00000550013 QRFPP83859 136 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 KLF5Q13887 457 aaPredicted RBP11.76□□□□□ -0.53
RAB5C-205ENST00000550013 ACSM3Q53FZ2 586 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 RBM48Q5RL73 367 aaKnown RBP11.76□□□□□ -0.53
RAB5C-205ENST00000550013 TTC23Q5W5X9 447 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 IL34Q6ZMJ4 242 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 AHSA2Q719I0 299 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 POC5Q8NA72 575 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 SETD9Q8NE22 299 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 THRSPQ92748 146 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 PSORS1C1Q9UIG5 152 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 AK3Q9UIJ7 227 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 ADAM30Q9UKF2 790 aa11.76□□□□□ -0.53
RAB5C-205ENST00000550013 TRBV6-6A0A0A6YYG2 114 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 SOCS1O15524 211 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 SPDEFO95238 335 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 SYNJ2BPP57105 145 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 PJVKQ0ZLH3 352 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 GLT8D1Q68CQ7 371 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 NANOGP1Q8N7R0 232 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 OR9G4Q8NGQ1 327 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 EDARADDQ8WWZ3 215 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 PLEKHJ1Q9NW61 149 aa11.75□□□□□ -0.53
RAB5C-205ENST00000550013 GNAO1P09471 354 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 SCTP09683 121 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 ZBTB25P24278 435 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 DHRSXQ8N5I4 330 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 THAP7Q9BT49 309 aaPredicted RBP11.74□□□□□ -0.53
RAB5C-205ENST00000550013 TMED9Q9BVK6 235 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 LPAR5Q9H1C0 372 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 RETNQ9HD89 108 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 ZNF221Q9UK13 617 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 ALMS1Q8TCU4 4167 aa11.74□□□□□ -0.53
RAB5C-205ENST00000550013 IGKV1-6A0A0C4DH72 117 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 A0A0G2JLM5 398 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 IZUMO1RA6ND01 250 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 H3BUA1 57 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 M0R1X1 148 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 CNIH1O95406 144 aa11.73□□□□□ -0.53
RAB5C-205ENST00000550013 IGLV2-23P01705 113 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms