RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PPIAL4GP0DN37 164 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 HIST1H4AP62805 103 aaKnown RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 SRSF6Q13247 344 aaKnown RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 MYOZ1Q9NP98 299 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 TBC1D29Q9UFV1 150 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 ODAMA1E959 279 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 NPIPB6E9PJ23 425 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 MPDU1O75352 247 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 PLAUP00749 431 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 CEACAM1P13688 526 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 ZNF585BQ52M93 769 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 ALKAL1Q6UXT8 129 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 SYT8Q8NBV8 401 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 CST9LQ9H4G1 147 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 GPR132Q9UNW8 380 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 KCNE1BA0A087WTH5 132 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 CTSVO60911 334 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 ZNF32P17041 273 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 RPS20P60866 119 aaKnown RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 SSPNQ14714 243 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 RTN4RL2Q86UN3 420 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 OR1N1Q8NGS0 311 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 GPR35Q9HC97 309 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 AMMECR1Q9Y4X0 333 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 DSPPQ9NZW4 1301 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 CD8AP01732 235 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 TNFRSF4P43489 277 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 HSPE1P61604 102 aaKnown RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 KIAA0040Q15053 153 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 HEPN1Q6WQI6 88 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 WFDC8Q8IUA0 241 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 WFDC5Q8TCV5 224 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 C8orf44Q96CB5 159 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 SEMA5BQ9P283 1151 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 TRBV20OR9-2A0A075B6H5 130 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 AMBPP02760 352 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 HSD52Q0P140 79 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 RPS19BP1Q86WX3 136 aaKnown RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 C10orf111Q8N326 155 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 RNASEH2CQ8TDP1 164 aaKnown RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 MGST2Q99735 147 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 A0A1W2PQM1 296 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 CEACAM18A8MTB9 384 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 EREGO14944 169 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 CCL11P51671 97 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 SUMO3P55854 103 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-216ENST00000545170 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
ATXN3-216ENST00000545170 A0A1W2PPC1 479 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 H0YIG0 161 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 GPR82Q96P67 336 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 SDF2L1Q9HCN8 221 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 ZNF646O15015 1829 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-216ENST00000545170 TRIP11Q15643 1979 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 CGB1A6NKQ9 187 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 LAMTOR5O43504 91 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 ZNF865P0CJ78 1059 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-216ENST00000545170 C2orf68Q2NKX9 166 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 NABP2Q9BQ15 211 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 PDFQ9HBH1 243 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 MRPS18AQ9NVS2 196 aaKnown RBP7.48□□□□□ -1.21
ATXN3-216ENST00000545170 LRRC37A3O60309 1634 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 COX7A1P24310 79 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 ZBTB34Q8NCN2 500 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 SS18L2Q9UHA2 77 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 KCPQ6ZWJ8 1503 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 FAM157AC9JC47 383 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 LGALS7P47929 136 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 C10orf128Q5T292 105 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 ADAMTSL5Q6ZMM2 481 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 FAM181AQ8N9Y4 354 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-216ENST00000545170 DSCR4P56555 118 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-216ENST00000545170 CX3CL1P78423 397 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 RFLNBQ8N5W9 214 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 CLDND2Q8NHS1 167 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 SMIM8Q96KF7 97 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 DIRC2Q96SL1 478 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 KLHDC2Q9Y2U9 406 aa7.48□□□□□ -1.21
ATXN3-216ENST00000545170 IGKV3D-15A0A087WSY6 115 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 SYNGR1O43759 233 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 IGKV3-15P01624 115 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 RNF122Q9H9V4 155 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 PHLDA3Q9Y5J5 127 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 NALCNQ8IZF0 1738 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 ATP5LO75964 103 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 MYF5P13349 255 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 STARD6P59095 220 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 TMEM78Q5T7P6 136 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 SLC37A2Q8TED4 501 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 CXXC4Q9H2H0 198 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 C5orf66Q9H5L9 145 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 CCL26Q9Y258 94 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 C3orf80F5H4A9 247 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 NPSP0C0P6 89 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 NANOS3P60323 173 aaKnown RBP7.47□□□□□ -1.21
ATXN3-216ENST00000545170 SCGB3A1Q96QR1 104 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 LOXL3P58215 753 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms