RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 COL10A1Q03692 680 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 ZIC4Q8N9L1 334 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 WNT2BQ93097 391 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 R3HDM4Q96D70 268 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 MARS2Q96GW9 593 aaKnown RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 SIGLEC12Q96PQ1 595 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 TLNRD1Q9H1K6 362 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 PAM16Q9Y3D7 125 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 BMPR1BO00238 502 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 FGF16O43320 207 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 KLF7O75840 302 aaPredicted RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 HSPB1P04792 205 aaKnown RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 RPS16P62249 146 aaKnown RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 PAX5Q02548 391 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 FOXL2NBQ6ZUU3 175 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 RTN4RL2Q86UN3 420 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 LURAP1LQ8IV03 231 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 H1FOOQ8IZA3 346 aaPredicted RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 TMEM252Q8N6L7 170 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 PLSCR2Q9NRY7 297 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 DLL3Q9NYJ7 618 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 OR1A1Q9P1Q5 309 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 HSPB8Q9UJY1 196 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 ZNF716A6NP11 495 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 SNCGO76070 127 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 CRYABP02511 175 aaKnown RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 CELA3AP09093 270 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 OR5AL1P0C617 328 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 BRS3P32247 399 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 UCP2P55851 309 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 KLF3P57682 345 aaPredicted RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 ZNF124Q15973 351 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 BIVMQ86UB2 503 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 TGIF2LXQ8IUE1 241 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 VN1R17PQ8TDU5 208 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 GALNT14Q96FL9 552 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 TRAV39A0A0B4J263 110 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 GAGE10A6NGK3 116 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 DNASE2O00115 360 aaPredicted RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 MT-ND6P03923 174 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 RHOBP62745 196 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 ERHP84090 104 aaKnown RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 OR10X1Q8NGY0 326 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 HIST1H2BAQ96A08 127 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 GPR146Q96CH1 333 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 COL25A1Q9BXS0 654 aaPredicted RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 GPR61Q9BZJ8 451 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 SLC25A22Q9H936 323 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 PRDM6Q9NQX0 595 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 WASHC3Q9Y3C0 194 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 KIAA0100Q14667 2235 aaKnown RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 LHX2P50458 406 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 CLDN18P56856 261 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 AESQ08117 197 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 CXorf66Q5JRM2 361 aaPredicted RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 GGNQ86UU5 652 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 LHFPL1Q86WI0 220 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 WFDC8Q8IUA0 241 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 HSD17B10Q99714 261 aaKnown RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 FAM117AQ9C073 453 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 PRRG2O14669 202 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 TCTAP57738 103 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 Q1RN00 199 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 RNF144BQ7Z419 303 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 OR1L6Q8NGR2 347 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 LSM10Q969L4 123 aaKnown RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 RNF2Q99496 336 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 PINLYPA6NC86 204 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 LRRC3CA6NJW4 275 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 H0YIZ8 118 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 COX7A2P2O60397 106 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 GYPAP02724 150 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 ARSJQ5FYB0 599 aaPredicted RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 CALHM1Q8IU99 346 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 DEFB108BQ8NET1 73 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 PRSS3P2Q8NHM4 247 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 RFESDQ8TAC1 157 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 RNF166Q96A37 237 aaPredicted RBP4.95□□□□□ -1.62
VPS50-220ENST00000544910 TMEM167BQ9NRX6 74 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 DEPPQ9NTK1 212 aa4.95□□□□□ -1.62
VPS50-220ENST00000544910 TRBV23-1A0A0A0MS06 115 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 SHISA7A6NL88 538 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 J3QW42 95 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 RHBDL1O75783 438 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 TRGC2P03986 189 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 CSRP1P21291 193 aaKnown RBP4.94□□□□□ -1.62
VPS50-220ENST00000544910 RUNX1Q01196 453 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 C1orf174Q8IYL3 243 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 OR52L2PQ8NGH6 319 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 POM121L2Q96KW2 1035 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 P2RX4Q99571 388 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 RARRES2Q99969 163 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 TMEM204Q9BSN7 226 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 RBKSQ9H477 322 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 CYTL1Q9NRR1 136 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 OR6C3Q9NZP0 311 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 ANAPC10Q9UM13 185 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 IGKV1D-8A0A087WSZ0 117 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 IGSF23A1L1A6 192 aa4.94□□□□□ -1.62
VPS50-220ENST00000544910 C11orf94C9JXX5 98 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms