RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 RPUSD4Q96CM3 377 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 ARV1Q9H2C2 271 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 PATZ1Q9HBE1 687 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 RPRMQ9NS64 109 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MBNL3Q9NUK0 354 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 A0A0G2JNJ9 132 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 CXCL1P09341 107 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 ICAM4Q14773 271 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 AVPI1Q5T686 147 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 ZNF787Q6DD87 383 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MUCL1Q96DR8 90 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 Q9UFV3 132 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SCAF4O95104 1147 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 IGHV3-48P01763 117 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 NDUFB7P17568 137 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LYPD2Q6UXB3 125 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LYPD6BQ8NI32 183 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SCNM1Q9BWG6 230 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 IGHV3-72A0A0B4J1Y9 119 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 TMEM210A6NLX4 147 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 COX5AP20674 150 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 GRNP28799 593 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SRPXP78539 464 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 TNFAIP6P98066 277 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MORN2Q502X0 79 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 WDR25Q64LD2 544 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 Q8IYB0 196 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 COL27A1Q8IZC6 1860 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LINC00518Q8N0U6 118 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 RAB39BQ96DA2 213 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MEGF10Q96KG7 1140 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SPINT2O43291 252 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 IFNA10P01566 189 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SRP19P09132 144 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 ACSM6Q6P461 480 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LYG1Q8N1E2 194 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 RIMS4Q9H426 269 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 RRHO14718 337 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 PLAUP00749 431 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 IGHV1-46P01743 117 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 HOXA1P49639 335 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 NKX6-1P78426 367 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LRRC75BQ2VPJ9 315 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 PRR31Q5SQ13 230 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 C19orf35Q6ZS72 473 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MBD3L4A6NDZ8 208 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MBD3L3A6NE82 208 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MBD3L5A6NJ08 208 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 C15orf65H3BRN8 121 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LGALS4P56470 323 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 C4orf17Q53FE4 359 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 GFRALQ6UXV0 394 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LINC00596Q86U02 117 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 RPP25LQ8N5L8 163 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 CLDND2Q8NHS1 167 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 MBD3L2Q8NHZ7 208 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 EGLN1Q9GZT9 426 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SLC35B3Q9H1N7 401 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 FER1L5A0AVI2 2057 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SAA2-SAA4A0A096LPE2 208 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 PGPEP1LA6NFU8 196 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 ZNF98A6NK75 572 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 NUDT19A8MXV4 375 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 ZNF737O75373 536 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SAA2P0DJI9 122 aaPredicted RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 FGF7P21781 194 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 TAS2R30P59541 319 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SMIM21Q3B7S5 101 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 SLC35E4Q6ICL7 350 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 LINC01560Q8TB33 94 aa3.12□□□□□ -1.91
BRCA2-206ENST00000544455 STRAPQ9Y3F4 350 aaKnown RBP3.12□□□□□ -1.91
BRCA2-206ENST00000544455 A0A1B0GU03 582 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 IGLV1-44P01699 117 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 TUBG1P23258 451 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CCKARP32238 428 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 HABP2Q14520 560 aaPredicted RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 SSMEM1Q8WWF3 244 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 DERL1Q9BUN8 251 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 PBDC1Q9BVG4 233 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 WDR61Q9GZS3 305 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 LY6HO94772 140 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 YIF1AO95070 293 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 IGKV1-16P04430 117 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 BSPH1Q075Z2 132 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 TCF23Q7RTU1 214 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 DOLPP1Q86YN1 238 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 Q8WTZ3 238 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 HIPK2Q9H2X6 1198 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 IFI27L2Q9H2X8 130 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 GFOD1Q9NXC2 390 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CALYQ9NYX4 217 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 NDRG3Q9UGV2 375 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 WASF3Q9UPY6 502 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 TRBV6-6A0A0A6YYG2 114 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 MAP1LC3B2A6NCE7 125 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 GPR12P47775 334 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 RPS23P62266 143 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CATR1Q13166 79 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 SOHLH1Q5JUK2 328 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms