RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ZNF708P17019 499 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 C11orf87Q6NUJ2 197 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 RPS4Y2Q8TD47 263 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 BLNKQ8WV28 456 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 RNASE6Q93091 150 aaKnown RBP5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 LHFPL6Q9Y693 200 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 LOC102723996A0A087X1L8 192 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 CGB1A6NKQ9 187 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF705GA8MUZ8 300 aaPredicted RBP5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 LEUTXA8MZ59 168 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 TMEM238C9JI98 176 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 KIR3DL2P43630 455 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 HOXA4Q00056 320 aaPredicted RBP5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 PAX5Q02548 391 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 ATP6V1FQ16864 119 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 H3F3CQ6NXT2 135 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 OR1B1Q8NGR6 318 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 RSPO3Q9BXY4 272 aaPredicted RBP5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 C17orf51A8MQB3 221 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 OR2H2O95918 312 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 NANOS3P60323 173 aaKnown RBP5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 DYRK2Q92630 601 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 SH2D2AQ9NP31 389 aa5.94□□□□□ -1.46
SRGAP1-206ENST00000543397 IGHV3-72A0A0B4J1Y9 119 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 SOX15O60248 233 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 WDFY1Q8IWB7 410 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 P2RX4Q99571 388 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 WDR61Q9GZS3 305 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 NAGKQ9UJ70 344 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 PSME4Q14997 1843 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 SBF1O95248 1867 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 ANKRD20A5PA0PJZ0 165 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 ODAMA1E959 279 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM24AA6NFZ4 105 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 NPIPB13A6NJU9 1138 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 NPIPB4C9JG80 1138 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 SIAH2O43255 324 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 BCL2L11O43521 198 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 HBZP02008 142 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 LOXL3P58215 753 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 NEU4Q8WWR8 484 aaPredicted RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM168AQ92567 244 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 MRGPRFQ96AM1 343 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 POLR3KQ9Y2Y1 108 aaPredicted RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 V9GYS6 101 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 MDC1Q14676 2089 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 DOCK8Q8NF50 2099 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 IGKV1D-42A0A075B6H8 117 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 A0A0G2JMM0 328 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 A0A1W2PPB8 328 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 A0A1W2PRS3 328 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 KIR3DP1A8MWS1 328 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 J3QR06 171 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 SMIM6P0DI80 62 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 MALP21145 153 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 RPL27AP46776 148 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 H3F3AP84243 136 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 BSPH1Q075Z2 132 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 PLAC9Q5JTB6 97 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 EEF1AKMT3Q96AZ1 226 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 PARD6GQ9BYG4 376 aaPredicted RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 E9PLN8 166 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 F5H697 171 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 SNAI2O43623 268 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 CECR9P0C854 216 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 RPL13AP40429 203 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 GCSAMLQ5JQS6 135 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 C10orf128Q5T292 105 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 CCDC140Q96MF4 163 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 AMELYQ99218 206 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 VKORC1Q9BQB6 163 aa5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 MRPS18AQ9NVS2 196 aaKnown RBP5.93□□□□□ -1.46
SRGAP1-206ENST00000543397 DHRS7CA6NNS2 312 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 CHST1O43916 411 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ZIC3O60481 467 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 CST4P01036 141 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 UBE2L3P68036 154 aaKnown RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 CFHR1Q03591 330 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 SNAI3Q3KNW1 292 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 DMRTA1Q5VZB9 504 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 MYO7BQ6PIF6 2116 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF841Q6ZN19 808 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 OR51I2Q9H344 312 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNF629Q9UEG4 869 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ZFHX2Q9C0A1 2572 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM74A7A6NL05 159 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 GSTZ1O43708 216 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 EIF3GO75821 320 aaKnown RBP eCLIP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 NPY1RP25929 384 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 TBR1Q16650 682 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 FAM74A3Q4VXF1 159 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 KLF7O75840 302 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 FSTP19883 344 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 G6PCP35575 357 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 LY6EQ16553 131 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 HAPLN4Q86UW8 402 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 C9orf106Q8NAJ2 232 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 RELL2Q8NC24 303 aaPredicted RBP5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 MRAPQ8TCY5 172 aa5.92□□□□□ -1.46
SRGAP1-206ENST00000543397 ZNRF4Q8WWF5 429 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms